Pukyongiella litopenaei: C6Y53_00085
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Entry
C6Y53_00085 CDS
T05357
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
thas
Pukyongiella litopenaei
Pathway
thas03410
Base excision repair
thas03430
Mismatch repair
thas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C6Y53_00085 (recJ)
03430 Mismatch repair
C6Y53_00085 (recJ)
03440 Homologous recombination
C6Y53_00085 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thas03400
]
C6Y53_00085 (recJ)
DNA repair and recombination proteins [BR:
thas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
C6Y53_00085 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C6Y53_00085 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C6Y53_00085 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHHA1
DHH
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
AVO36267
UniProt:
A0A2S0MKB2
LinkDB
All DBs
Position
15794..17539
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AA seq
581 aa
AA seq
DB search
MSFLGVDASLTKRRWVGPSIETDRAAEALAQETGLPRQLCQVLARRGVAAAETEAFLAPT
LKDLLPDPRSLMDMETAAARVVDAVRKRQKIAVFADYDVDGGSSAALLLVWLRGLGMDAT
LYVPDRIDEGYGPNEPAMRELAAAHDLVICVDCGTLSHGPIAAAQGADVVVLDHHLGGET
LPPAHAVVNPNRQDESGDLGHLCAAAVVFLMLVEARRQMRVADLGDGPDLMALLDLVALA
TVADVAPLTGVNRAFVRQGLRVMARRDRPGLRALADVARMNTAPAPYHLGFLLGPRINAG
GRIGRADLGARLLATADEAEAQALAERLDMLNSERREVEETVRAAALAQAEARGLDAPLV
WAAGEGWHPGVVGIVASRLKETAHRPSIVIGMDGEIGKGSGRSVSGIDLGAAIQRLASEG
LLLKGGGHRMAAGLTVARDRLEPAMERLAELLARQGADRLGRADLKLDGLLAPGAATTEL
IDRMEQAGPFGASAPAPRFALPDLAIGHARRVGESHLKLTLKDGQSGRIDAICFGAYDSA
LGPALEKHGGARFHFAGRLEINDWGGRRSAQLRLEDAAPAA
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgagttttctgggtgtcgatgcgtcgctgaccaaacgccgttgggtcggcccgtcgatc
gaaaccgaccgcgcggccgaggcgctggcccaggagaccggcctgccccggcagctgtgc
caggtgctggcgcgccggggggtggcggcggccgaaaccgaggcgttcctggccccgacg
ctgaaggacctgctgccggatccgcgcagcctgatggacatggaaaccgccgccgcgcgc
gtggtcgacgcggtccggaaacggcagaagatcgcggtctttgccgattatgacgtggat
ggcgggtcgagcgcagcgttgctgctggtctggctgcgcgggctgggcatggatgcgaca
ttgtatgtgcccgaccggatcgacgaaggatatggccccaacgaacccgcgatgcgagag
ctggcggcggcgcatgatctggtgatctgcgtcgattgcggcaccctgagccacgggccg
attgccgcggcgcaaggcgcggacgtggtcgttttggatcatcacctgggcggcgaaacc
ctgccccccgcgcatgcggtggtgaaccccaaccgtcaggacgagagcggcgatctcggt
catctctgcgccgcggcggtcgtgttcctgatgctggtcgaggcgcggcggcagatgcgc
gtcgcggacctgggtgacgggcccgacctgatggcgctgcttgacctggtggcgctggcc
acggtggccgatgtcgccccgctgaccggcgtcaatcgcgccttcgtccggcaggggctg
cgggtgatggcccgccgcgaccggccggggctgcgcgcgctggcggacgtggcgcggatg
aacaccgccccggccccgtatcacctggggttcctgctgggaccgcgcatcaatgcgggc
ggacggatcgggcgggcggatctgggcgcgcggctgctggccacggcggacgaggccgaa
gcgcaggcactggccgaacggctggacatgctgaacagcgaacgccgggaagtcgaggaa
acggtgcgcgccgccgccctcgcccaggccgaggcgcgcgggctcgacgcgccgctggtc
tgggccgcgggcgaaggctggcaccccggggtggtcggcatcgtcgcctcgcgcctgaag
gaaaccgcgcatcgcccgtccatcgtgatcgggatggacggtgagatcggaaagggctcg
gggcggtcggtttcggggatcgatctgggcgccgcgatccagcggctggcgtcggaaggc
ttgctgctcaagggtggcggccaccgcatggcggcaggtctgaccgttgcccgcgacagg
ctggagcccgccatggagcggctcgccgagctgcttgcacggcagggcgccgaccgtctc
ggacgggccgacctgaagctggacggtttgctggcaccgggcgcggcgacgacggaactg
atcgatcggatggaacaggccgggccgttcggcgcgagcgcccctgccccgcgttttgcg
ctgcccgaccttgcgatcggccatgcccgccgcgtcggcgaaagccacctgaaactgacg
ctgaaggatggccagagcgggcggatcgacgccatctgctttggcgcatatgacagcgcc
ctcgggcctgcgctcgagaagcacgggggcgcgcgattccactttgccggtcgtctggaa
atcaatgactggggcggcagaaggtctgcgcagctgcgtctggaggacgcggcaccggcc
gcctga
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