Pukyongiella litopenaei: C6Y53_16475
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Entry
C6Y53_16475 CDS
T05357
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
thas
Pukyongiella litopenaei
Pathway
thas03030
DNA replication
thas03430
Mismatch repair
thas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C6Y53_16475
03430 Mismatch repair
C6Y53_16475
03440 Homologous recombination
C6Y53_16475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thas03032
]
C6Y53_16475
03400 DNA repair and recombination proteins [BR:
thas03400
]
C6Y53_16475
Enzymes [BR:
thas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C6Y53_16475
DNA replication proteins [BR:
thas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C6Y53_16475
DNA repair and recombination proteins [BR:
thas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C6Y53_16475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
DEDDh_C
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AVO39850
UniProt:
A0A2S0MVB6
LinkDB
All DBs
Position
complement(3380970..3382382)
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AA seq
470 aa
AA seq
DB search
MFGRLGLRLRVFLIFCLLALGGMAIVAGALVLGYMRAGRPELAGAFVLSGVLAGFLFLGL
VAGIWFLFDENVARPIVRLAAALRARAHAGASGDIDLHGARYLGDLAPAAQAVTGQLMQS
ALDTAGAVATETARLQAERDRLTALLTDIPVAMMIVSPAHRIVLYDGQAAEVLAQVAPPR
LDASLFDYFDRGAVEEAHVRLTQTGREVAFRALGARGAQGYDARLKPLGGAPGYMLVIDA
EEARIAPEAARPLVYDFGLLDTPGDELFENRPLSGLCYVAFDTETTGLLPHKDAVLQIGA
VRVLRGRPVEGEELDLLVDPGRPIPPASTRVHHITDAMVAGAPDIAAAGRRLHDFARDAV
LVAHNAPFDMAFLRNDADRMGVTWDHPILDTVLLSAVLFGPGEVHTLDALCGRLDVEIDP
ADRHTALGDARATALALCRMLPILEARGMKRFGDVIAETRRHGRLLEDLN
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgttcggccggctgggcctgcggctgcgggtctttctgatcttctgcctgctggcactg
ggcggaatggcgatcgtcgccggggcgctggtgctgggctacatgcgcgcgggccggccc
gaactggccggcgccttcgtcctgtcgggagttctggccgggttcctgttcctcgggctg
gtggcggggatctggttcctgttcgacgagaacgtggcccgccccatcgtccggctggcc
gccgcgctgcgcgcgcgcgcccatgccggtgccagcggtgacatcgacctgcatggtgcg
cgctatctcggcgacctggcaccggccgcgcaggcggtgaccgggcaattgatgcagtcg
gctctggacacggcgggcgccgtggcgacggaaaccgcgcggctgcaggccgaacgcgac
cggctaaccgccctgctgacggatattcccgtcgcgatgatgatcgtcagccccgcccac
cggatcgtgctctatgacgggcaggccgccgaggtgctggcccaggtggcgccgccgcgg
ctcgatgcctcgctgttcgactatttcgaccgcggcgcggtggaggaggcccatgtccga
ctgacgcagaccggccgcgaggtggcgtttcgcgcattgggcgcgcggggggcgcagggc
tatgacgcgcggctgaaaccgttgggcggcgcgcccggttacatgctggtgatcgacgcc
gaggaggcgcggatcgcccccgaggccgcgcgtccgctggtctatgatttcggattgctg
gatacgccgggcgacgagctgttcgagaaccgccccctgtccgggctctgctatgtcgcc
tttgacaccgaaaccaccgggctgttgccgcacaaggatgccgtgctgcagatcggcgcg
gtgcgggtgctgcgcggacggccggtcgagggcgaggaactggacctgctggtggatccg
ggccggccgatcccgcccgcctcgacacgggtgcaccacatcaccgatgcgatggttgcc
ggcgccccggatatcgccgcagccggtcgccgcctgcatgatttcgcgcgtgacgccgtc
ctggttgcccataacgcgcccttcgacatggcgttcctgcgcaatgacgccgaccgcatg
ggggtcacctgggaccatccgatcctcgacacggtgctgttgtcggcggtgctgttcgga
ccgggcgaggttcacacgctggacgcgctgtgcggtaggctggatgtcgagatcgacccc
gcggaccggcataccgcgttgggcgatgcccgtgcgaccgcgctggcgctgtgccggatg
ttgccgattctcgaggcgcgcggcatgaaacggttcggggatgtgatcgccgaaacccgg
cgccacgggcggctgctggaagatctcaactga
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