Infirmifilum lucidum: IG193_04670
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Entry
IG193_04670 CDS
T06910
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
thel
Infirmifilum lucidum
Pathway
thel03022
Basal transcription factors
thel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
thel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
IG193_04670
09124 Replication and repair
03420 Nucleotide excision repair
IG193_04670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thel03021
]
IG193_04670
03400 DNA repair and recombination proteins [BR:
thel03400
]
IG193_04670
Enzymes [BR:
thel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
IG193_04670
Transcription machinery [BR:
thel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
IG193_04670
DNA repair and recombination proteins [BR:
thel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
IG193_04670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
PilZNR
Motif
Other DBs
NCBI-ProteinID:
QOJ78089
UniProt:
A0A7L9FEC7
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All DBs
Position
complement(849670..851442)
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AA seq
590 aa
AA seq
DB search
MEELVARIKGFFPYMNPRSGQLELARLVYESVVGSKILLARYPVGFGKTAAALAGALASG
VPRIVYLAHSKSQFQAPIREAARLVDRGVGLAVVTLTSKKDLCLFPRKLVTEMDYDRFAR
FCLLKRVSRECPYKDTIESLEVPQVLTVSLLRRLGREKQVCPYAVAWRALEKARIIIASY
PYLFDLSLLNILVEKGRVNLSETLVIIDEAHNLPTFISDSLSSQLSESTIRSALREIQRF
GGQGFLEIREALKSFLLLLDKKASEEGEEIPAEVFLEIAPPSTSLNLLAQAVEQKTGTVS
AVWYVSEFISKVENMPGDTVLLALDEHGSKLFKIHFYNVSRIARKVFQSIRSAVLLSATL
PPADYYTAVLGIEKDKLLEVTYPFAWGENVELTITRGISSRYVLRTGELYKRYARLIDAI
FAEPESLHVLAVFPSYSFMMEVYPFLKARPRLMERHDTALDEILNFLLENRKGLVMIVAW
GKFSEGVEFRALKKNLIDTIVIAGLPVPTPSPSNQRLLKTLKDATGDWKWAWNQVFLYPA
LMKTIQIIGRGIRSETDCIRVYLLDERAAEPEALGFFELYGIAPRVFPEN
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggaagagctagtagccaggatcaaggggttcttcccatacatgaacccgcgtagtgga
cagctcgagttagcgaggcttgtgtatgagagcgttgtgggctctaagatactactcgcc
cgctatccagtagggttcgggaagactgccgcagctctcgcaggggctctagcgtctggc
gtcccacgcatagtgtaccttgcccactcgaagagccagtttcaagctccaattcgcgag
gccgcaagactcgttgatagaggagtgggcctcgccgttgtaacgcttacgagcaagaag
gatctctgtctttttcccaggaaactggtaacggagatggattatgatcgcttcgcgagg
ttctgcctcctgaagagagtgagcagagagtgcccctataaggacactatagaatccctt
gaggtaccacaggttctgacagtctccctattgaggaggctaggacgtgaaaaacaagta
tgcccctatgcggtagcttggagagctttggagaaagccaggattattatagcatcttat
ccctatctcttcgacctgtcgctcttgaacatccttgtagagaagggtagagtaaatctt
tctgaaactctcgtaatcatcgatgaagcacacaaccttcctacgtttatttcagacagc
ctgagtagccagctaagcgagtctactataaggtctgcactgagggaaatccaaaggttt
ggggggcaggggttcctggagattagagaagccttaaaaagtttcctcttgctcctagac
aagaaagcctcagaggaaggggaggaaattcctgctgaggtattcttggagatagctccg
ccgtccacaagcctaaacttgctagcccaagccgtcgagcagaagacaggcacagtttct
gctgtgtggtatgtctcagaatttataagtaaagtggagaacatgcctggcgacactgta
ctcctagccttagacgagcatgggagtaagttgttcaaaatacatttctacaatgtctcc
agaattgctaggaaagtattccagagcataagatcggccgttttgctgtcggctactctt
ccccccgcagactactacacggcagtactgggcattgaaaaggataagttgttagaggtt
acgtacccgtttgcatggggagagaatgttgagttgaccattacacggggaatctcatca
aggtatgtgttaagaacaggcgagttgtacaagcgctatgcccggcttatcgacgctatt
ttcgcggaacctgaaagcctccacgtgttagctgtcttcccctcgtactcatttatgatg
gaagtctatccattcctgaaagccaggccgaggctcatggagaggcacgatacagcgctc
gacgagattctcaacttcttattagaaaataggaaaggccttgtaatgattgtcgcttgg
gggaagttctccgagggagttgagtttagagcgttgaaaaagaacctaatcgatactatt
gttattgccgggttgcctgttccaaccccctcccccagcaaccagaggcttttaaaaacc
ctcaaggatgcgacgggagactggaagtgggcgtggaatcaagtattcctatatccggct
ctaatgaagactattcaaattattggtagagggataaggtctgagactgactgcattaga
gtatacctcttggacgagagagcagctgaacccgaggctttagggttcttcgaactatat
ggtattgcccctcgcgtctttccggagaactaa
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