Thiomonas arsenitoxydans: THI_1650
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Entry
THI_1650 CDS
T02347
Name
(GenBank) putative Nuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
thi
Thiomonas arsenitoxydans
Pathway
thi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
thi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
THI_1650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thi03400
]
THI_1650
Enzymes [BR:
thi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
THI_1650
DNA repair and recombination proteins [BR:
thi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
THI_1650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
CAZ88327
UniProt:
D6CSQ8
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All DBs
Position
1640958..1641761
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AA seq
267 aa
AA seq
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MLPFPLRVTTLNLNGVRSAANKGVDDWLRSQARPDVLCVQELKALEADMTPSLRTLGGLP
GAAFQHAEKPGYSGVGLYWKHEPDEVRIGFGHAEFDAEGRYVEAIYKRSGGGRLSIVSAY
FPSGSSSEERQQAKFRFLADFHEHLLALKAAGEVLLCGDVNIAHKEIDLKNWKGNLKNSG
FLPEERAWMTRLIDEAGYVDVFRQLDPAPNRYTWWSNRGQARAKNVGWRIDYHLATPGIA
AQAKSDSAWIYTEQRFSDHAPLTIDYA
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgttgcctttccccttgcgcgtgaccactctgaatctcaatggcgtacgttccgccgcg
aacaagggggtcgatgactggctgcgctcgcaggcacgcccggatgtgctctgcgtgcag
gaactcaaagcgctggaagccgatatgacgcccagcctgcgtaccttgggtggattgccc
ggggccgcatttcagcacgccgagaagcccggctacagcggcgtcggcctctattggaag
cacgaacccgatgaagtgcgcatcggttttggccatgccgagttcgacgcggaagggcgc
tatgtcgaagccatttacaagcgctcgggcggcgggcgtctatccatcgtgtccgcctac
tttccctcgggctccagctccgaggagcgccagcaggcgaaatttcggttcctggccgat
ttccacgaacaccttctggccctgaaggccgcaggcgaggtgctgctgtgcggcgatgtc
aacatcgcccacaaagagatcgacttgaagaattggaaaggcaacctcaagaacagcggc
ttcctgccggaagagcgcgcctggatgacccgactgattgatgaggcgggctatgtggac
gtgtttcgccaactcgaccccgcgccaaatcgctacacatggtggagcaatcgcgggcag
gcccgagcgaaaaacgtgggatggcgcatcgactatcacctggccactcccggcatcgcg
gcgcaggctaaatcggatagcgcctggatttacacggagcagcggttttccgatcatgct
ccgctaactatcgactacgcctga
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