Thiomonas arsenitoxydans: THI_2517
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Entry
THI_2517 CDS
T02347
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
thi
Thiomonas arsenitoxydans
Pathway
thi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
THI_2517 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thi03019
]
THI_2517 (recQ)
03400 DNA repair and recombination proteins [BR:
thi03400
]
THI_2517 (recQ)
Enzymes [BR:
thi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
THI_2517 (recQ)
Messenger RNA biogenesis [BR:
thi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
THI_2517 (recQ)
DNA repair and recombination proteins [BR:
thi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
THI_2517 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
NADH-G_4Fe-4S_3
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
CAZ89142
UniProt:
D6CV23
LinkDB
All DBs
Position
2481173..2483026
Genome browser
AA seq
617 aa
AA seq
DB search
MPKKFPSALDALQHVWGYPAFRSLQAQAIDHVVAGRDALVLMPTGGGKSLCFQIPALLRE
GVGIVVSPLIALMQDQVAALRELGLRAAFLNSTLDATEARAVQRAARQGELDLLYMAPER
LLSESGQALLDDLRIALFAIDEAHCVSQWGHDFRPEYGQLSLLRERWPEVPRVALTATAD
EPTRHEIVQRLLHDGAEFVSSFDRPNIRYRVVEKRDGRAQLLQFIRSEHPHDCGVVYALS
RNTVEEVAEMLAGHGLRALPYHAGLPAAIRTAHLRRFLDEDGIVMVATIAFGMGIDKPDV
RFVAHLDMPKSIEGYFQETGRAGRDGLPATAWMAYGLADVVQQRRLIDLSDADDAYKRLS
TAKLDAMLALAEAADCRRVRLLGYFGEASAPCGNCDNCLNPPQLIDATEAAQKLLSTIYR
CRQASGTSFAASHLIDVLRGKRTEKTERHGHHALSTFGIGADLSETDWRLLLRQLVAQRL
VEVDAAHFNVLHLTDASRAVLKGAQRIHLKHREPGAERRRRSTNGSTTSTGTRPTMQAMS
SADAELFAHLRTWRAATAKEHGVPAFVVFPDATLQAIALARPDSLDALRGISGVGDKKRD
TYGAALLEVIAQASEMG
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagaagtttccctctgccctggacgcgctgcaacacgtctggggctaccccgcg
ttccgcagtttgcaagcccaggccatcgaccatgtggtcgcgggccgcgacgccctggtg
ctcatgccaacgggtggcggcaagtcgctgtgcttccagattccggccctgctgcgcgag
ggcgtgggcatcgtggtgtcgccgctgatcgcgctgatgcaggaccaggtggctgcgctg
cgcgagctggggctacgcgccgcctttctcaactccacccttgacgccacagaggccaga
gcggtgcagcgcgcggcgcgccagggcgagctggacctgctctacatggcgcccgaacgc
ctgctgagcgaatccggccaggctctgctcgacgatttgcgcatcgccctgttcgccatc
gacgaggcgcattgcgtctcgcaatggggccacgatttccgcccggaatacggccagctc
tcgctgctgcgcgagcgctggcccgaagtgccgcgcgtggcgctgaccgccaccgccgac
gagcccacgcggcacgaaatcgtgcagcgcctgctgcacgacggcgccgagttcgtctcc
agcttcgaccgccccaacatccgctaccgtgtggtggaaaaacgcgacggccgcgcccaa
ctgctgcagttcatccgcagcgaacatccgcatgactgcggcgtggtgtacgccctgtcg
cgcaacaccgtagaggaagtggccgagatgctcgcgggccacggcctgcgcgccttgccc
tatcacgccggcctgcccgcggccatacgcacggcgcacctgcggcgttttctcgatgaa
gacggcatcgtcatggtggccaccatcgccttcggcatgggcatcgacaagcccgatgtg
cgtttcgtcgcccaccttgacatgcccaagtccatcgagggctattttcaggaaaccggc
cgcgccgggcgcgacggcctgcctgcaaccgcatggatggcttacggcctggccgacgtg
gtgcagcaacgtcggctgatcgacctgtcggacgccgacgacgcctacaagcgcctgtcc
accgccaagctcgacgccatgctggccctggccgaagccgccgactgccgccgcgtgcgc
ctgctgggctacttcggcgaagccagcgcgccctgcggcaactgcgacaactgcctgaac
ccgccgcaactcatcgacgccaccgaggccgcgcaaaagctgctatccaccatctaccgc
tgccgccaggccagcggcaccagcttcgcagccagccatctcatcgacgtgctgcgcggc
aaacgcaccgagaagaccgagcgtcacggccaccatgcgttgtccaccttcggcatcggc
gccgatctgagcgagaccgactggcgcttgctgctgcgccagctcgtcgcacaacgactg
gtcgaagtggacgccgcgcatttcaacgtgctgcacctcaccgacgccagtcgcgcggtg
ctcaagggcgcgcagcgcatccacctcaagcaccgcgagcctggcgcggagcgccgtcgc
cgcagcaccaacggcagcaccacgtcgaccggcacgcgaccgaccatgcaggccatgtcg
agcgccgatgccgagctgttcgcccacctgcgcacctggcgcgcagccaccgccaaagag
cacggcgtgcccgcctttgtggtgtttcccgacgccacgctgcaggccatcgccctggcc
cggccggatagcctggatgcgctacgcggcatttccggcgtgggcgacaaaaagcgcgac
acctacggcgccgcgctgctcgaagtcattgcacaggccagcgagatgggctga
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