Thiocapsa sp. M50B4: KFB96_08795
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Entry
KFB96_08795 CDS
T07253
Name
(GenBank) SWIM zinc finger family protein
Organism
thim
Thiocapsa sp. M50B4
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SWIM
SNF2_assoc
DEAD
Motif
Other DBs
NCBI-ProteinID:
QVL50503
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Position
complement(1928813..1932133)
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AA seq
1106 aa
AA seq
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MPSAPLLLDPETLKHAIPPTYLERGRRYLQEQRVLSADHDAERGIVTGRVRGSGGRIYQC
IVQLGERADGALTVVGQCSCPVGYNCKHVAAVLLSLGRRATRATLPAAARALPFQLKSWL
DQIERASGVPEEEPHRILYLIDPEEYLGIRRTRVRAAKVRQLLAGGYGKPQDFNILGSSR
ASFVGPADQRIMGLLAIARGGADPSAVYLDTLTGADVMQTIARTGRGHLRTIDGPVLRDA
GPLAARLEWRLAEDARLHVILEADRPGLLLLPMSPPWYLDPETGDCGPLETGLDDREAGV
LAAAPVVAPESVEALEQAARERFKGRSVHLPKSPERRRSHSEIPVPRLRLRSVDRAASSV
GRYWGIQRQPEWAHHAVLEFAYGATSVDPRDRAPVLRRVEQGVLVEVERQPAAEQAAIGM
LEASGFHRTTEASDADGLWLERADPETWIDFMQDGLPDLAAQGWRIEVEEGFHFRIAEIG
DWEMDIAEGEGGNWLDLGLGVEVDGQRVDLLPLLVELIGRYQVDLSTRTLAAMDAETRLQ
MRLPDGRLILMPVERLRPILSTLIELYDPEGPLGSQGSKGRLRLSRVHAAQLAELEAAAP
ALRWRGGESVREWGRKLRDFQGLEGIVPPVGLTVELRPYQRQGLDWLQFLREYGLGGVLA
DDMGLGKTVQTLAHLLVEKESGRADRPSLVVAPTSLLFNWRREAERFAPALRVLSLHGST
RHTRFASIPDHDLVLTSYPLLPRDLEALAEQEFHLLILDEAQNIKNPRSKAAQAARGLNA
RHRICLTGTPMENHLGELWSLLDFLMPELLGDERRFRRLFRVPIERHGDDVRQDELRRRV
APFLLRRTKETVAAELPPKSEIIREVPLADDQRDLYETLRLALHEKVREEVARKGLARSG
IIILDALLKLRQVCCDPRLVSLESARRVKGSAKLELLMTLLPDLLEEGRRVLLFSQFTSM
LALIEEELIKRGLREDQDFVKLTGRTRNRDRPVDRFQDEEVPLFLISLKAGGTGLNLTAA
DTVIHYDPWWNPAAERQATDRAHRIGQDKPVFVYKLLTEGTVEQRVADLQARKQALADAM
LAGGGAASGTLSPDDLDLLFAPLVDD
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgccttccgctccactgctgctcgaccccgaaaccctgaaacatgcgatcccgccgacc
tacctggaacggggcaggcgttatctccaagagcagcgcgtgctgagcgcggatcacgat
gccgagcgcgggatcgtgacggggcgtgtacggggctcgggcgggcggatctatcagtgc
atcgtgcaactcggcgagcgggccgacggcgccctgacggtggtcggacaatgctcctgt
ccggtggggtacaactgcaagcacgtggcggccgtattgttgtcgttgggtcggcgagcg
acgcgcgcaaccttgccggccgcggcgcgcgcgctgccgtttcagttgaagagctggctc
gatcagatcgagcgtgcgtcgggcgttcccgaggaggaaccccatcgcatcctctatctc
atcgatccggaggagtacctcgggatcaggcgcacgcgggtgcgtgctgcgaaggtgcgg
cagttgctcgccggcggctacggtaaaccacaggatttcaacatcctcggttcctcccga
gcgagtttcgtcggtccggcggatcaacgcatcatggggttgctcgcgatcgcgcggggc
ggcgccgacccgagcgcggtctatctggacacgctgaccggcgcggatgtcatgcagacc
atcgcgcggaccggacgtggtcatctgcgcacgatcgatggcccggtcctgcgcgatgcg
ggtccgctcgcggctcggttggagtggcgtctcgcagaggatgcccggctgcacgtgatc
ctcgaggccgaccgcccggggctcttgttgctgccgatgtcgccgccctggtatctggat
ccggagaccggcgactgtggtccgctcgagaccggcttggatgaccgcgaggccggcgtc
ttggccgcagccccggtggtggcgcccgagtcggtggaggcactggagcaggccgcgcgg
gagcgtttcaaggggcgctcggttcacctgcccaagagccccgagcgacgtcgcagccac
tcggagatacccgttccacggctgcgtctgcgcagcgtcgatcgggcggcaagcagcgtg
ggacgctactggggtatccagcgtcagcccgagtgggcacatcatgccgtgctcgagttc
gcctatggcgctacctcggtcgatccgcgcgaccgcgcgccggtgctgcgtcgcgtcgag
cagggcgtgcttgtggaggtggagcgtcaacccgccgccgaacaggcggcgatcggcatg
ctcgaggcgtcgggtttccatcgcaccacggaggcgtccgacgccgatggtctctggctc
gagcgtgccgatcccgaaacctggatcgatttcatgcaggatgggctgcccgatctcgcg
gcgcagggttggcggatcgaggtcgaggagggctttcattttcggatcgccgagatcggc
gattgggagatggacatcgcggagggcgagggcgggaactggctcgacctggggttgggc
gtggaggtcgacggacagcgggtcgacctgcttccgctgctggtggagctgatcggtcgc
tatcaggtggacctctccacgcggacgctcgcggcgatggacgccgaaacgcgcctgcag
atgcggctgcccgacgggcggctgatcctgatgccggtggagcgtttgcggcccatcctc
tcgaccttgatcgagctgtacgaccccgagggtccgctgggatcacaggggagcaagggc
cgcttgcgtctgtcgcgtgtccatgccgcacagctcgcggagctggaggcggcggccccg
gcgctgcgctggcgcggcggggagtcggtgcgcgaatggggccggaagctgcgtgacttc
caggggttggaggggatcgtgccgcccgtcgggctgaccgtcgagcttcggccctatcag
cgccaagggctcgattggctgcagtttctacgcgaatacgggctcggcggtgtccttgcc
gacgacatgggtctcggcaagacggtgcagaccctggcccatctcttggtcgagaaggag
agcgggcgggccgatcgcccgagcctggtggtcgcgccgacgagtctcctcttcaactgg
cgccgcgaggccgagcggttcgccccggcgttgcgggtcctctcgctgcacggctcgacg
cgacacacgcggttcgcgtccatcccggatcacgacctggtgctgacgagctacccgctg
ctgccgcgtgatctggaggcactcgcggagcaggagttccacctgctgatcctggacgag
gcccagaacatcaagaatccgcgcagcaaggccgcacaagcggcccgcgggttgaacgcc
cgccatcggatctgcctgaccggcaccccgatggagaatcatctcggcgagctgtggtcg
ctgctcgatttcctgatgcccgagctgctcggcgacgagcgccgtttccggcggctgttc
agagtcccgatcgagcgccatggcgacgacgtgcgtcaggacgagctgcgtcggcgggtc
gccccgttcctgttgcgtcgcaccaaggaaaccgtcgccgccgagctgccgcccaagagc
gagatcatccgcgaggtcccccttgccgacgatcagcgcgatctctacgagaccctgcgc
ttggcattgcacgagaaggtgcgcgaggaggtggcgcgcaagggccttgcgcgcagcgga
atcattatcctggacgccctgctgaagctgcgccaggtgtgctgtgatccgcgtctggtg
tcgctcgagagcgcgcgccgggtcaaaggctccgccaagctggagctcttgatgaccctg
ttgcccgatctgctcgaggaggggcggcgcgtgctgctcttctcgcagtttacgagcatg
ctggccttgatcgaggaggagctgatcaagcgcggactgcgcgaggatcaggacttcgtg
aaactcaccgggcgcacccgcaatcgcgaccgtccggtcgatcgcttccaggacgaggag
gtgcccctgttcctgatcagcctcaaggccggcggcaccgggctgaacctcaccgcggcg
gacaccgtgatccactatgacccttggtggaaccccgcggccgagcgccaagcgaccgac
cgggctcaccgcatcggccaagacaagccggtgtttgtctacaagctcttgaccgagggc
actgtcgagcaacgcgtcgccgatctgcaggcgcgaaaacaggccctcgccgacgcgatg
ctcgcaggcggcggtgccgcatcaggcaccttgagtccggatgacctggatctcttgttc
gcacccttggtcgacgactga
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