KEGG   Thiomicrospira sp. S5: AYJ59_05215Help
Entry
AYJ59_05215       CDS       T05796                                 

Gene name
gatB
Definition
(GenBank) glutamyl-tRNA amidotransferase
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
thio  Thiomicrospira sp. S5
Pathway
thio00970  Aminoacyl-tRNA biosynthesis
thio01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:thio00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    AYJ59_05215 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:thio03029]
    AYJ59_05215 (gatB)
Enzymes [BR:thio01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     AYJ59_05215 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     AYJ59_05215 (gatB)
Mitochondrial biogenesis [BR:thio03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    AYJ59_05215 (gatB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GatB_N GatB_Yqey YqeY
Motif
Other DBs
NCBI-ProteinID: AZR81737
UniProt: A0A3S9TMF5
LinkDB All DBs
Position
1146405..1147835
Genome map
AA seq 476 aa AA seqDB search
MTWEVVIGLEIHAQLTTKTKIFSGSSIAYGAEPNTQANLLDLGMPGQLPVLNKAVIPKAI
RLGLALSAEIGKRSVFDRKNYFYPDLPKGYQTSQFSYPIVDKGGFLDIEVDGETKRIGVT
RAHLEEDAGKSIHDAFPGQTGVDLNRAGTPLLEIVSEPDMRSAQEAVAYAKKMHELVQYL
GICDGNMQEGSFRVDSNVSIHKPGTPFGTRAELKNINSFKFIEQAIEYEIQRQIDILESG
GQVVQETRLYDADKNETRSMREKEEANDYRYFPCPDLLPVVITDEDIEAIRADMPELPEA
KRQRYVADFGLSDYDAAFLTGSRAMAEYFEAVLAETNEPKVSANWVMGELSKALNQNDMD
IADSPVSAAQLAGLIARIQDQTISGKIAKQVFDAIWAGEGDADAIIEQKGLKQITDSSAI
EAMVDDVLANNPSQVEAYKGGQEKMFGFFVGQVMKASQGQANPAQVNQILKEKLQS
NT seq 1431 nt NT seq  +upstreamnt  +downstreamnt
atgacttgggaagttgtgattggtttagagattcacgctcaattaaccactaaaacaaaa
attttttccggctcatccattgcttatggtgcggagccgaacacccaggccaatttgttg
gacttggggatgccgggacaattgccggtattgaataaagcggtgattccgaaagcgatt
cgcttgggcttggccttgagtgccgaaatcggtaaacgttcggtctttgaccgtaaaaac
tatttttatccggatttgccgaaagggtatcagacctcgcagttttcgtatcccatcgtc
gataaaggcggttttttggatattgaagtggacggtgaaaccaagcgaattggtgtcacg
cgcgctcatttggaagaagacgccggtaaatcgattcacgatgcctttccagggcaaacc
ggggtggatttgaaccgtgccgggacgcctttgttggaaatcgtgtccgaaccggacatg
cgttcggctcaggaagcggtggcttatgccaagaaaatgcatgaactggtgcagtacttg
gggatttgcgacggcaatatgcaggaaggctctttccgggtggattccaatgtctcgatt
cataagccgggtacaccgtttggaacacgtgccgagttgaaaaacatcaactcgtttaag
ttcattgagcaagccatcgagtatgaaattcagcgccagatcgatattttggaatccggc
ggccaagtcgtgcaggaaacccgtttgtacgatgccgataaaaacgaaacccgttccatg
cgtgaaaaggaagaggccaacgattaccgttacttcccgtgcccggacttgctgcctgtg
gtgattaccgacgaagacattgaagcgatccgggccgatatgccggagttaccggaggcc
aagcgtcaacggtacgtcgcggatttcgggttgtcggattacgatgcggcgttcttaacc
ggttcacgcgccatggcggaatattttgaagccgtgttggcggaaaccaatgaacccaaa
gtgtctgccaactgggtgatgggcgagttgtcgaaagcgctgaaccaaaacgatatggat
attgccgattcaccggtttccgcggcgcagttggccggtttgattgcacgcattcaggat
cagaccatttccggtaagattgctaagcaggtgttcgatgcgatttgggcgggcgagggt
gacgccgatgcgattatcgagcagaaaggccttaaacaaatcaccgattcctcagcgatt
gaggcgatggttgatgacgtcttggcgaacaacccatctcaagtggaggcctataaaggc
ggccaggaaaagatgttcggtttctttgtcgggcaggtgatgaaagcttcgcaaggtcaa
gccaatccggctcaggtcaatcagatactgaaagagaagctgcagtcttaa

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