Thiohalocapsa sp. PB-PSB1: N838_00010
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Entry
N838_00010 CDS
T07019
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
thip
Thiohalocapsa sp. PB-PSB1
Pathway
thip03030
DNA replication
thip03430
Mismatch repair
thip03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N838_00010
03430 Mismatch repair
N838_00010
03440 Homologous recombination
N838_00010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thip03032
]
N838_00010
03400 DNA repair and recombination proteins [BR:
thip03400
]
N838_00010
Enzymes [BR:
thip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N838_00010
DNA replication proteins [BR:
thip03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
N838_00010
DNA repair and recombination proteins [BR:
thip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
N838_00010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
QQO51991
LinkDB
All DBs
Position
1660..2769
Genome browser
AA seq
369 aa
AA seq
DB search
MNIELFRSALLPALSAVSGVVERRQTLPILGNLLLTVTGEQVAIRATDLELEVATQAIAT
VSEEGQATVPARKFLDICRALPDGARIRLKIDGERALVTSGKSRFSLSTLPADNFPSMDA
DRAEISLQCPSSLLKRMLDKTAFAMAQQDVRYYLNGVLLELSVGRLTAVATDGHRLARVV
ADIPTGVEAEEDHRQVVVPAKTVMEVKRLLPAQDELVNIELSTRTIRVAFGETLIVSKLV
DGKYPAYERVIPAGLPRKALLDKEALRSSLQRAAILCNEKYKGVRVGFTTGVLGLQAHNP
EKEQADDEIEIEYDGDSIVIGFNVAYILDVIQAVEQSRVEVSFRDADSSAIWRGEGSENE
TFVIMPMRL
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcgagcttttccgatccgcactgttgcccgcactgagcgcggtttccggcgtg
gtcgaacgacgtcagacattgccaatacttggcaatcttttgcttaccgtcacaggggaa
caggtcgcgatacgggcgactgacttggagctggaggttgctacgcaggcaatcgccacg
gtttcggaggaggggcaggcaaccgtgccggcgcgcaagttcctggacatttgccgcgcg
ttacccgacggggcacgcatacggcttaaaatcgatggcgaacgggcattggtcacgtcc
gggaaaagtcgcttttcattaagcaccttgcccgccgacaattttccttcgatggatgct
gaccgtgccgagattagcctgcagtgcccctcctcattgctaaaacgcatgttggataaa
actgcctttgccatggcgcagcaggacgttcgctactatctcaatggtgtgttgctcgaa
ttgtcagttgggcggctgaccgcggtggcgaccgatggacatcggctcgcaagggtcgtg
gctgatataccaacaggtgtggaggctgaagaagaccaccgtcaggtggtggtgccggca
aagacggtgatggaagtaaaacgtcttttgccggcgcaggatgaactggtcaacatcgag
ctttctacacggacaattcgagtagcctttggggaaacgctcatcgtatccaagttggtg
gatgggaaatatcctgcctatgagcgggtcattcccgctgggcttccccgcaaggcgttg
ctggacaaggaagcattgcgatcatcgctgcagcgagccgcaattctgtgcaatgaaaaa
tacaaaggggttcgcgtaggcttcaccacgggagtacttgggttgcaagcacataatcca
gagaaggagcaagccgacgacgagatcgaaatagagtacgacggcgattccatcgtcatc
ggtttcaatgtggcgtacatattggatgtcatccaggcagtcgagcaatcgcgggtcgag
gtctcctttcgcgacgccgacagcagcgcaatctggcgtggcgaaggcagcgaaaacgag
accttcgtgattatgccgatgcgcctatga
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