Candidatus Thiothrix singaporensis: HZT40_17830
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Entry
HZT40_17830 CDS
T06729
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
this
Candidatus Thiothrix singaporensis
Brite
KEGG Orthology (KO) [BR:
this00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
this03019
]
HZT40_17830 (orn)
03009 Ribosome biogenesis [BR:
this03009
]
HZT40_17830 (orn)
Messenger RNA biogenesis [BR:
this03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HZT40_17830 (orn)
Ribosome biogenesis [BR:
this03009
]
Eukaryotic type
Pre-60S particles
RNases
HZT40_17830 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QLQ33139
UniProt:
A0A7L6AVK1
LinkDB
All DBs
Position
complement(3523744..3524292)
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AA seq
182 aa
AA seq
DB search
MSIHQENLIWIDLXMTGLDAFNDAIIEIATIVTDKYLNILAEGXVIAIHQPEAALAAMDD
WNQRQHGGSGFIQRVRESVWTEAGAEQATLEFLRQYVPAGASPMCGNTICQDRRFLARHM
PELEKFFHYRHLDVSTLKELASRWRPGLPDGFKXDSKHLALDDIRDSIEELKFYREHFIR
LE
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgagcattcatcaggaaaatttgatctggatcgatctgnaaatgaccgggctggacgca
ttcaatgacgccattatcgaaatcgccaccatcgttaccgacaagtatttgaatatcctg
gcggaaggcncggtgatcgccatccatcagccagaagcggcgctggcggcgatggatgac
tggaaccagcgccagcacggcggctccggctttatccagcgggtgcgggaaagcgtctgg
acggaggcgggggcggaacaggccacgttggaattcctcaggcaatatgtaccggcgggc
gcctcgccgatgtgcggcaacaccatctgccaggatcggcgtttccttgcccgccatatg
ccggaactggaaaaattcttccactaccgtcatctggatgtcagcaccctgaaagagctg
gccagccgctggcggccagggctgccggacgggttcaaanaggattccaaacatctggcg
ttggacgacatccgcgattcgattgaggaactgaaattctaccgggagcatttcatccgg
ctggagtag
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integrated database retrieval system
