Tetragenococcus halophilus NBRC 12172: TEH_13040
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Entry
TEH_13040 CDS
T01640
Gene name
uvrB
Definition
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
thl
Tetragenococcus halophilus NBRC 12172
Pathway
thl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
thl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TEH_13040 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thl03400
]
TEH_13040 (uvrB)
DNA repair and recombination proteins [BR:
thl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TEH_13040 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TEH_13040 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_7
AAA_30
AAA_19
AAA_5
Kinesin
Microtub_bd
AAA
AAA_25
T2SSE
UB2H
Motif
Other DBs
NCBI-GeneID:
11261049
NCBI-ProteinID:
BAK94631
UniProt:
G4L7V7
LinkDB
All DBs
Position
1300579..1302561
Genome map
AA seq
660 aa
AA seq
DB search
MIEKELSHQFELVSNYQPSGDQPEAIEELTDGVLDHKKAQILLGATGTGKTYTISNVIQN
VNKPTLIIAHNKTLAGQLYGEFKEFFPNNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSI
NDEIDKLRHSATSSLLERNDVVVVASVSCIFGLGSPMEYQKQVVSLRQGMEISRDELLHS
LIDIQFERNDIDFQRGRFRVRGDVVEIFPASRAERALRVEFFGDEIDRIREVDALTGEIL
NETEHVSIFPATHFVTDEDHMETAIASIKQELDTRLAILKENNKLLEAQRLEQRTNYDIE
MLREMGYTSGIENYSRHMDGREEGEPPYTLLDFFPEDFLIVIDESHVTMPQIRGMYNGDR
ARKQMLVDYGFRLPSALDNRPLRLEEFEKHVNQIIYVSATPGPYEYDQTDTVVEQIIRPT
GLLDPVIDVRPIMGQIDDLVGEINERVERDERVFVTTLTKKMAEDLTDYFRELGIKVKYL
HSDIKTLERTEIIRNLRLGEFDVLVGINLLREGLDVPEVSLVAILDADKEGFLRSERSLV
QTMGRAARNADGEVVMYADKVTDSMQNAIDETTRRRKIQEAYNEEHGIVPQTVKKDVRDL
ISISSVTEEGEEKQVSYEDLTKDEKEDLIEKLNTEMKEAAKSQNFEKAANLRDSILELKA
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaaagaattatcacatcaatttgaacttgtttcaaattatcagccgtcaggg
gaccaacctgaagcaattgaagaattaactgatggggtgttagatcataaaaaggctcaa
attcttttaggtgctaccggaacggggaagacttatactatttcaaatgtgatccaaaat
gtaaataagccaacactgattattgctcacaataaaacactagcgggtcagctatatgga
gaatttaaggaatttttccctaataatgcggtggagtacttcgtaagttattatgattat
tatcaaccagaagcttacgtcccatcaagcgatacttatattgaaaaagattccagtatt
aatgatgaaattgataaattacgccattcagccactagctcgttattagaacgtaatgac
gttgttgttgttgcttcagtatcgtgtatttttggtttgggttcaccaatggaatatcaa
aaacaagttgtttctttgcgtcaaggaatggaaatctctcgagatgaattattacactca
ttgatcgatatccaatttgaacgtaatgatatagattttcaacggggacgttttcgtgta
agaggcgatgttgttgaaatctttccggcttcacgtgctgaacgtgctttaagagttgaa
ttttttggtgatgaaatcgatcgaatacgtgaagttgatgcgttaacgggtgaaatatta
aatgaaacagagcatgtttctattttcccggcgactcactttgtgacagatgaagatcat
atggaaactgctattgcttcgattaagcaggaattagatactcgtttagcaattttaaaa
gaaaataataaattattagaagcacaacgattagaacaaagaacgaattatgatattgaa
atgttgcgagaaatgggctatacttcaggcattgaaaactactctagacatatggacgga
agagaagaaggagagcccccgtatacactattagactttttccctgaggactttttaata
gtgatcgatgaatctcacgtaactatgccgcaaattcgcgggatgtataatggagaccgg
gccagaaaacagatgctggttgactatggttttcgtttaccttcagccttagacaaccga
ccattaaggttagaagaattcgaaaaacatgtgaatcagattatttatgtttctgcgaca
ccaggtccttacgaatacgaccagacagatacggtggttgaacaaatcattcgtccaact
ggtttattggatccagtgattgatgtccgtcctattatgggacagatcgatgatcttgta
ggggaaatcaatgaacgtgtggaaagagacgagcgtgtttttgttacaactttaactaaa
aaaatggcggaagatttaaccgactatttccgagaattaggaataaaagtcaagtacctt
cacagtgatattaaaacattagaacgaacagaaattatccgcaacttgcgattaggtgag
tttgatgttttagtaggaattaacttactaagagaaggtttagatgtgcctgaagtttct
cttgtcgcgatattagacgctgataaagaaggctttttgcgtagcgaacgttcccttgta
caaacgatgggaagagcggctagaaacgctgatggtgaggttgtgatgtatgctgataaa
gtgactgattctatgcaaaatgctatagatgaaaccactcgtcgtcgtaaaattcaagaa
gcatacaatgaagaacacgggattgttccacaaacagttaaaaaagatgttcgagattta
atttcaatttcttctgttaccgaagaaggcgaagaaaaacaagtctcttacgaagatctt
acaaaagatgaaaaagaagatttaattgaaaaattaaatacagaaatgaaagaagctgct
aaatcgcagaattttgaaaaagcagctaatttacgtgattcgattttagaattaaaagct
taa
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