KEGG   Tetragenococcus halophilus NBRC 12172: TEH_18970
Entry
TEH_18970         CDS       T01640                                 
Symbol
hsdR
Name
(GenBank) type I restriction-modification system restriction subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
thl  Tetragenococcus halophilus NBRC 12172
Brite
KEGG Orthology (KO) [BR:thl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:thl02048]
    TEH_18970 (hsdR)
Enzymes [BR:thl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     TEH_18970 (hsdR)
Prokaryotic defense system [BR:thl02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   TEH_18970 (hsdR)
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N ResIII DEAD Helicase_C SNF2-rel_dom Nucleolin_bd
Other DBs
NCBI-GeneID: 11260262
NCBI-ProteinID: BAK95224
LinkDB
Position
complement(1900162..1903257)
AA seq 1031 aa
MSFAEDNYENAIIELFCDKLDYDYVPGWDVDRDYNEPLYLDELMTSLERINPTLSRAAID
EAVNKLRRFDNGTLVQINKVFTSYLQNGIEVSYYDRGEQKASLVKLVDFENISKNSFTVI
NQWTIDEYSRKRPDVLVFLNGIPVVVFELKSPSREETNASDAYLQLKTYQKEIPSLFNYN
AFCVMSDLAISKAGTITAGEDRFMEWKTIDGSYENTQYAQWDTLIEGMFEKKRFLDILEN
FICFSDDAKILAAYHQYFAVHKAVVSAIKATETDGRGGVFWHTQGSGKSLSMVFFTHMIQ
KILNLPTVVILTDRNDLDEQLYAQFAKCTNFLRQEPVQASNREELKNLLDGRQANGIIFS
TMQKFVESEEPLSERRNIIVMADEAHRGQYGLDEKVDTKTGQIKFGAARRVRDSLPNASY
IGFTGTPISKKDKSTTEVFGNYIDVYDMTQAVEDGATRPVYYESRVIHLKLDNDVLKHID
DEYDLMAESADSQAIEKSKQELGRLDSILGAEQTINALVDDIVQHYEENREQELTGKAMV
VAYSRSIAIKIYHKMLEKRPSWAKTIGVVMTSSNNDPEEWHNIIGNKKHKEEMAKKFKDS
DDEFKIAIVVDMWLTGFDVPSLATMYVYKPMSGHNLMQAIARVNRVYKEKEGGLIVDYVG
IAGALKQAMNDYTQRDKSNFGDPNVAETALPKFKEKLEVCRDIFHGLDYSAFLDEDATNL
TRAKIISGGVNFLSSIDKEEQKEEYLKQALLLRQALQLCRSLLGARERFEAAYFEAVRTV
LTRISGEGDKLSLKEINGRINSLLKASIKSEGVVNLFSDAETEFSLFDPQFLDEIANMKE
KNLAVELLKKLIAEQISLYKQTNLVKSKKFSEMLSNSMKAYLNGMLTNEEVIQELKDMAK
DMKNATEEGTDLGLTDEELAFYDAITKPEAVEDFIENDQLVSLTHELTDMLRKSRTVDWQ
KKESARAHMRRKVKKLLRKYKYPPEGMEEAISTVTQQCELWVDIGSYYYDSAREVNGLPM
VADKDENFRVR
NT seq 3096 nt   +upstreamnt  +downstreamnt
atgtcttttgcggaggataattatgaaaatgcgataattgagctattttgcgataagtta
gactacgattatgtccctggttgggatgtagatcgagactataatgaaccgttgtattta
gacgagttaatgacgtctttagagcgaattaatccaacactttccagagcggccatcgat
gaggctgtgaataaattaaggcgctttgataatggaacgctagttcagataaataaggtg
tttacaagctatctacagaatggaatagaagtttcttattatgatcgaggcgaacagaag
gctagtttggttaaattagtagattttgaaaatataagcaaaaattcatttacagtcata
aatcagtggactattgatgagtatagtaggaaacgtcctgatgtactagtatttctaaat
ggtattccagtagtagtatttgagcttaaaagcccttcgcgagaagaaaccaatgcatcg
gatgcttatttacaattaaaaacttatcaaaaggagatacctagtttatttaattataat
gctttttgtgttatgagtgatttagcaatttcaaaagctggaactataactgctggtgaa
gatcgttttatggaatggaaaacaattgatggtagttacgagaatacacaatatgctcaa
tgggatactttaatagagggaatgtttgagaaaaaacgttttcttgatattcttgaaaat
tttatttgtttttccgatgatgcaaaaatcttagcagcttatcatcaatatttcgctgtt
cataaagcggttgtgtctgctataaaagcaacagaaacagacggacgtggtggtgttttt
tggcatacgcagggtagtgggaagtctttgtcaatggtattttttactcatatgatacaa
aagattcttaacttacccacagttgtgatattaactgatcgtaatgacttagatgaacaa
ctttatgcgcaatttgctaagtgtactaattttttaagacaagaaccagttcaagcaagt
aatcgtgaagaacttaaaaatttgcttgatggtcgccaagcaaatggcattatctttagt
actatgcaaaaatttgtagaatctgaggagcctttatcagaacgaagaaatataattgtt
atggcagatgaagctcatcgtgggcaatatggtttggatgagaaagtagatactaaaaca
ggtcaaattaaatttggagcagctcgtagagtacgtgatagtttacctaatgccagctat
attggatttactggcacgccaatttctaaaaaggataaatctactactgaggttttcggg
aactatattgatgtttatgatatgacacaggctgtagaagatggtgcaactcgtcctgtt
tattacgaaagtcgtgtgattcatttaaaactagataatgatgttttaaaacatattgat
gatgagtacgatctaatggcagaaagtgctgacagccaagcaattgaaaaaagtaagcaa
gaattaggtcgtttagattctatattaggcgcagagcaaacaattaatgctttagtcgat
gatattgttcaacattatgaagaaaatcgtgaacaagagttaacaggaaaagcaatggtt
gtggcttattctcgttcaatagcgataaaaatttatcataagatgttagagaaaagacca
agttgggctaagacaataggcgttgtaatgacttctagcaataatgatcctgaagaatgg
cataatattattggtaataaaaagcataaagaagaaatggctaagaaatttaaagatagt
gatgatgaatttaagatagccattgtcgttgatatgtggttgactggatttgatgttcct
agtttagcgacaatgtatgtttataaaccaatgagtgggcacaatttaatgcaagcaatt
gctcgagtgaatcgtgtttacaaagaaaaagagggcggtttaattgttgattatgttgga
attgctggtgctttaaaacaggcgatgaacgattacactcaaagagacaaaagtaacttt
ggtgatcctaatgtggctgaaacagctttgcctaagtttaaagaaaaactagaagtttgt
cgtgacatctttcatggtcttgattattctgcttttttagacgaagacgcgactaatctt
accagggcaaaaattataagtggtggtgtaaattttttatccagtattgataaagaagaa
caaaaagaggaatatctaaaacaagctttattattacgacaagcactacaactttgtcgt
tcattactaggagcaagagaaaggtttgaagcagcatattttgaagctgtgcgaactgta
ttaacccgaattagtggtgagggtgataaattatcgctgaaagaaattaatggacgcatt
aatagtttattaaaagccagtattaaaagtgaaggagtagttaatctcttttctgacgct
gaaacagagttttcattatttgatccacaatttttggatgaaattgctaatatgaaggaa
aagaacttagctgttgaacttttgaaaaagttaattgcagagcaaatttctctttataaa
caaacgaatttagtcaaatctaagaaattttcagagatgttatctaattctatgaaggca
tatttgaacggaatgttgacaaatgaagaagtaattcaagaattaaaagatatggcgaaa
gatatgaaaaatgctactgaagaaggaactgatttaggtttaactgatgaagaactggca
ttttatgacgctattactaaaccggaagctgttgaggatttcattgaaaacgatcagtta
gtatcattgactcatgaacttactgatatgttacgaaaaagccgtacagttgattggcaa
aagaaagaatcagcacgtgctcatatgcgtcgtaaagtaaaaaaacttttgcgtaaatat
aaatatccaccagaaggtatggaagaagcaatttcaacagtaactcagcaatgtgagttg
tgggtagatattggaagctattattatgatagtgccagagaagtaaatggactaccaatg
gtggcagacaaagacgaaaactttagagttagataa

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