Thermosynechococcus sp. NK55: NK55_01435
Help
Entry
NK55_01435 CDS
T02977
Symbol
rnb
Name
(GenBank) ribonuclease II Rnb
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
thn
Thermosynechococcus sp. NK55
Brite
KEGG Orthology (KO) [BR:
thn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thn03016
]
NK55_01435 (rnb)
Enzymes [BR:
thn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NK55_01435 (rnb)
Transfer RNA biogenesis [BR:
thn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NK55_01435 (rnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AHB87662
UniProt:
V5V4A6
LinkDB
All DBs
Position
complement(294393..296423)
Genome browser
AA seq
676 aa
AA seq
DB search
MEKGTLIEFRVNNQRRLAVIDRPEGKKHWIAIDQHLQAHTIHPRQLTFTVPEERFRPQEI
PTFWQQVQPLLDADSLEVAWEIIREENRTITPADLAELLFSERSAVACYAAYYLLSEDRF
YFKLKGETYEPRPAAQVAELKHQSQREAQRLAEEVSFREHLAQALRGEAVEWSASDRRRL
EQLERYAIAIESSAQHQAAIDLLSELKRPTQPLGAFQLLVDLGLWSEHENLFLRRSQIDV
EFSAKVLAVAHERLTSPPTDIDAPLRRDLTHLKVYTIDDESTQEIDDGLSLEVLGDRQKL
WIHIADPSRWVMVDDVLDQEARRRATTVYLPTGMIPMFPTELATGPMSLVAGQTCCALSF
GILLAESGEVLEYEICPSWIRPTYRLSYDDVDMILEQGVTGEADLLAIAQWGQRRSEWRR
QRGAIRIHIPEPNIKVAGEEVEISPLHDSPARQLVAEMMILAGEVAAHFGAREGIPLPFR
SQAPPELPSEEELLQLPAGIVRDCAIRRCMPRSEMGTQPNPHASLGLDAYCQVTSPIRRY
TDLLAHRQIKAHLRGETPPLTPEQLNEILLGLVSSLQESSLVERQTNRYWCLEYLRRHRE
EVWRGILLRWLRPEEGLGLVLLEDLAVELAMRFQRQAKLGECVLVRVSRVDPRSDQIWLE
EVPAETPMPAETVALS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
gtggagaaaggcaccctcattgaatttcgggtcaataaccagcgtcgcttggcggtcatc
gatcgccccgaaggtaaaaagcattggattgccattgatcagcatctgcaagcccacacc
atccatccgcgccaactcacatttacggtgcccgaagagcggtttcgcccccaagagatt
cccacattttggcagcaggtgcagcccctcttggatgccgacagtttagaagtggcttgg
gaaattatccgcgaggaaaaccgcaccattacaccggcggatttagccgagctgcttttt
tcggagcgatcggcggtggcctgctatgccgcctactatcttctcagcgaggatcgcttc
tatttcaagctcaagggagaaacctacgagcctcggccagcggctcaagtggcagaactc
aaacatcaaagccagcgggaagcccaacgcctggcggaggaagtcagctttcgcgaacat
ttagctcaagcccttaggggcgaagctgtggagtggtcggccagcgatcgcaggcgcctg
gaacagttagaacgttatgctatagccattgaatccagtgcccaacaccaagctgccatt
gatctcctcagtgagttaaagcgtcctactcaacccctaggggcattccaactgctggtg
gatctcggcctttggtcggagcacgaaaatctcttcctgcgccggagtcaaattgatgtt
gaattttctgccaaggtacttgctgtggcccatgaacgcctgacctcaccccccacggac
attgacgctcccctgcgccgcgatctcacccatctcaaggtctatacgattgacgatgaa
agcacccaagaaattgacgatggccttagcctagaggtcctgggcgatcgccaaaagctc
tggattcacattgccgatcccagccgctgggtgatggtggatgatgttttagatcaggag
gctcgccgccgcgccacaacagtctatctgccgacggggatgattcccatgtttcccacc
gagttggccacaggcccgatgagtttggttgcgggacaaacctgttgcgccctgagtttt
ggcattcttttggctgagagtggcgaggttttagagtacgaaatttgccccagttggatt
cgtcccacctatcgccttagctatgacgatgtggacatgattttggagcaaggggtaact
ggagaagcggatctgctggcgatcgcccaatggggacagcggcgcagtgagtggcgacgg
caacggggagcgattcgcatccacatccctgaaccaaacattaaagtggctggtgaagag
gtggaaatctcgcccctccatgattcacccgcccgccagctcgtggcagaaatgatgatt
cttgccggtgaagtggctgcccattttggcgcccgtgagggcatccccctgccctttcgc
agtcaagcgccgccagaactgccctcagaggaggaattgctgcaactacccgctggaata
gtgcgcgactgtgccattcgccgctgtatgccccgcagtgaaatgggtacccaacccaat
ccccatgcgagccttggccttgatgcctactgccaagtgacgtcccccattcgccgctac
acggatctgctggcacaccgtcagattaaagcccacctgcggggggaaaccccaccccta
acacccgagcaactgaatgaaattctcctggggctggtgtcttcccttcaggagtcttcc
cttgtggagcggcaaaccaaccgctattggtgcttagagtatctgcggcggcatcgcgaa
gaggtgtggcggggcattttactgcgttggttgcgtcctgaggaggggctggggctggtt
ctgttggaggatttggcggtggaactggcaatgcgctttcaacggcaggccaagttggga
gagtgtgtgctggtgcgcgtcagtcgtgtggatccccgcagtgatcaaatttggctggag
gaggtgcctgctgagacaccaatgcccgcagaaaccgttgcattatcctaa
DBGET
integrated database retrieval system
