Candidatus Thioglobus autotrophicus: SP60_04745
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Entry
SP60_04745 CDS
T04079
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
tho
Candidatus Thioglobus autotrophicus
Brite
KEGG Orthology (KO) [BR:
tho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tho03019
]
SP60_04745
03009 Ribosome biogenesis [BR:
tho03009
]
SP60_04745
Messenger RNA biogenesis [BR:
tho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SP60_04745
Ribosome biogenesis [BR:
tho03009
]
Eukaryotic type
Pre-60S particles
RNases
SP60_04745
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
CobA_CobO_BtuR
RE_NgoBV
Motif
Other DBs
NCBI-ProteinID:
ALE52578
UniProt:
A0A0M5LER6
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All DBs
Position
complement(883625..884167)
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AA seq
180 aa
AA seq
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MNKETNLIWIDLEMTGLLPERDVIIEIATIVTDKDLNILAEGPALVIHQGSEILAGMDEW
NTEHHTKSGLVQRVKDSVISTKQAEKQTIEFLEKYVTAGTSPMCGNTVCQDRRFLYNYMP
ELEKFFHYRHVDVSTLKELLVRWKPEAKMIRTGEPAHLALLDIRDSIDELKYYRDVFIDV
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagaaacaaatttaatttggattgacttagaaatgaccggcctattgccagag
cgtgacgtgattattgaaatcgccaccattgtgacggataaagatcttaatattttggca
gaagggcctgctttggtcattcatcaaggtagtgaaattctagcaggcatggatgagtgg
aataccgagcaccataccaaatctggcctagttcagcgtgtcaaagatagtgttatttcc
accaaacaagcagaaaaacaaaccatcgagtttttagaaaaatacgtaactgctggcacc
tcacctatgtgtggcaacactgtttgccaagataggcgttttttatacaattacatgcct
gaattagaaaagtttttccactatcgtcatgttgatgttagcactctaaaagagctttta
gtacgctggaaacctgaagcgaaaatgattcgaacaggtgagcctgcgcacttagcacta
cttgatattcgcgattcaattgatgaattaaaatactaccgagacgtctttattgatgtt
taa
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