Thermotoga sp. 2812B: T2812B_02285
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Entry
T2812B_02285 CDS
T03494
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
thq
Thermotoga sp. 2812B
Pathway
thq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
thq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
T2812B_02285 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thq03400
]
T2812B_02285 (uvrA)
DNA repair and recombination proteins [BR:
thq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
T2812B_02285 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
T2812B_02285 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_21
nSTAND1
AAA_16
AAA_29
AAA_15
ATPase
RsgA_GTPase
nSTAND3
DnaJ_CXXCXGXG
Rad50_zn_hook
SLFN-g3_helicase
BCA_ABC_TP_C
DUF5351
Motif
Other DBs
NCBI-ProteinID:
AIY86006
LinkDB
All DBs
Position
443859..446609
Genome browser
AA seq
916 aa
AA seq
DB search
MNEIVVKGARVHNLKNITVRIPKNRLVVITGVSGSGKSSLAMDTIYAEGQRRYLESLSTY
ARQFLGNLKKPDVDEIEGLSPAIAIDQKTVSHNPRSTVGTVTEIYDYLRVLYARIGKAHC
PECGRPLEKKSIDEILQDLFNSFKEGSRIYILAPVATEKKGTFKKEIEEFISKGFARIEI
DGEIYRLEEVPELDKNKRHTVKLVVDRLILETRNEHRILDSLELAMREGKGFVEIRNVDT
GESKIFSENLMCPVCGIGFPEITPKLFSFNSPYGACPNCHGLGFTFEVDPSLVIDEEKSV
LEGAIIPYRWDRRLSRWVAREIEKRGASPRLPFKDLPEDVKEFILYGDDRFEGVVPKVQR
WHRETESPEMKEWLEKNFIVQRTCSVCGGRRLNREALSVKINGLNIHEFTELSISEELEF
LKNLNLTEREREIVGELLKEIEKRLEFLVDVGLEYLTLSRSATTLSGGESQRIRLATQIG
SGLTGVIYVLDEPTIGLHPRDTERLIKTLKKLRDLGNTVIVVEHDEEVIRNADHIIDIGP
GGGTNGGRVVFQGTVDELLKNPDSSLTGEYLSGKRKITVNKTRRLPYASLKIKGVRHNNL
KNIDVEIPLGVFVCVTGVSGSGKSSLVMETLYPVLMNLLHKTKLPTGEFDSIEGHENIDK
VIAIDQSPIGRTPRSNPATYTKVFDEIRSLFAMTPAAKARGYNKSRFSFNLKGGRCEACQ
GQGYVKIEMLFLPDVYVECDVCKGKRYNRETLEITYKGKNISDILDMTVDEALEFFKNIP
SIKRTLQVLHDVGLGYVKLGQPATTLSGGEAQRIKLASELRKRDTGRTLYILDEPTVGLH
FEDVRKLVEVLHRLVDRGNTVIVIEHNLDVIKNADHIIDLGPEGGKEGGYIVATGTPEEI
AKNPHSYTGRFLKNVL
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaaatcgtggtgaaaggagcaagagttcacaatctgaaaaacataaccgtgagg
attccaaagaataggcttgttgtcataacgggagtttcgggatcgggaaagtcttcactc
gccatggacacgatatacgccgaaggacagagaagatatctggagtcactttctacgtat
gcgagacagttcctcggcaacctgaaaaaacctgatgttgacgaaatagaagggctttcc
cccgccatagccatagatcagaaaaccgtctctcacaatcccagatcaaccgttggaacg
gtgacggaaatttacgattacctgagggtgctctacgcgaggataggaaaagcccactgc
cctgagtgcggaaggcctctcgagaaaaagagcatcgatgagatccttcaggatttgttc
aattctttcaaagaagggagtcgaatctacatactcgcaccagttgcgacggagaagaaa
ggaacattcaaaaaagagatcgaagagttcatttccaaaggattcgcgagaatagaaata
gacggcgagatttacagactcgaggaagtgccagaactcgacaagaacaaacgacacact
gtgaaactggtggtcgataggttgatccttgaaaccagaaacgaacacaggatactggac
agcctcgagcttgcaatgagggaaggaaaaggattcgtcgagatcagaaacgtcgacacc
ggagagagcaaaatcttcagcgaaaacctcatgtgcccggtgtgtggtatcgggtttcca
gagatcacaccaaagctgttttctttcaacagtccgtacggtgcgtgtccgaactgtcac
ggcctcggcttcacatttgaggtggatccatccctcgtgatagacgaagagaagagcgtt
ctcgagggtgcgatcattccgtacagatgggacagaaggctctcgagatgggtcgcaagg
gagatagaaaagcgaggcgcttcccctcgccttcccttcaaagatctgcccgaagatgtg
aaagagttcatcttgtacggagatgaccgtttcgaaggagtggttccaaaagtccagagg
tggcatagagaaacggaatctcccgagatgaaggagtggctggaaaagaacttcattgta
cagagaacctgctccgtctgcggtgggagaagattgaacagggaagccctctctgtgaag
ataaacggtttgaacatacacgagttcaccgagctttctatctcagaagaactcgaattt
ttgaaaaatctgaatctcaccgaaagagagcgggaaatcgtgggagaactcctgaaggaa
atagaaaaaaggctcgaattcctcgtggacgttggactagaatatctcactctctccaga
tccgccaccacactctctggaggagaatctcagagaataaggctcgcaacgcagataggt
tcgggtctcacaggagtcatctacgtgctggatgaaccgactattggactccacccgagg
gacacagagcgactgataaagaccctcaaaaagctcagggatcttggaaacacggtgata
gtggtggaacatgacgaagaagtgatcaggaacgctgaccacattatagacatcggacca
ggtggaggaacgaacggcggtcgggtcgtcttccagggcactgtggatgaacttttgaaa
aatccagacagctctctgacgggtgaatacctctcggggaaaagaaagatcacagtaaac
aaaacgaggcggcttccttacgcgtctttgaagatcaaaggcgttcgtcacaacaatctg
aaaaacatagacgttgagattcccctcggtgtcttcgtctgtgtcacgggagtgtcggga
tccggaaaatcttccctcgtcatggaaacgctctacccagtgctgatgaatctccttcac
aaaaccaaacttcccactggagaattcgattcaatcgaaggccacgagaacatcgacaag
gtgatcgcgatagatcaatctcccattggaagaacaccgaggagcaacccagccacctac
accaaggtgttcgacgaaataagaagcctctttgccatgacccccgctgctaaggcacgt
ggttacaacaagagcaggttcagcttcaatctgaagggaggaaggtgcgaagcctgtcag
ggtcagggttacgtgaagatagagatgctcttccttcccgatgtgtacgtggagtgcgat
gtttgtaagggaaagagatacaacagagaaacactcgagataacctacaaaggaaagaac
atttctgatatactcgatatgacggtggatgaagcgctggagttcttcaagaacataccc
tctataaagagaacgcttcaggtcttgcacgatgtgggcttgggatacgtgaaactcggg
caaccggccaccaccctctccgggggtgaggcgcagagaataaagcttgcgtctgaattg
agaaaaagggacacagggagaaccctctacatactcgacgagccaactgttggacttcac
tttgaagacgtgaggaaactcgtggaagtgctccacaggctggtagatagaggaaacacc
gtaatcgtgatagaacacaatctcgatgtcataaaaaacgcagaccacatcatagatctc
ggtcctgaaggtggaaaagaaggtggctacatagttgcaacgggaacaccagaggaaata
gcaaagaatcctcactcttacaccggaagattcttgaagaacgtgttataa
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