Thermotoga sp. 2812B: T2812B_02575
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Entry
T2812B_02575 CDS
T03494
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
thq
Thermotoga sp. 2812B
Pathway
thq00040
Pentose and glucuronate interconversions
thq01100
Metabolic pathways
thq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
thq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
T2812B_02575
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
T2812B_02575
Enzymes [BR:
thq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
T2812B_02575
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AIY86062
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Position
complement(513794..514891)
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AA seq
365 aa
AA seq
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MRFSRVVSLVLLLIFTAVLTGAVKASLNDKPVGFASVPTADLPEGTVGGLGGEIVFVRTA
EELEKYTTAEGKYIIVVDGTIVFEPKREIKVLSNKTIVGINDAKIVGGGLVIKDAQNVII
RNIHFEGFYMEDDPQGKKYDFDYINAENSHHIWIDHCTFVNGNDGAVDITKYSNYITVSW
CKFVDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNCIQRMPRIRFGMAHVFNNFYSM
GLRTGVSGNVFPIYGVASAMGAKVHVEGNYFMGYGAVMAEAGIAFLPTRIMGPVEGYLTL
GEGDAKNEFYYCKEPEVRPVEEGKPALDPREYYDYTLDPVQDVPKIVVDGAGAGKLMFEE
LNTAQ
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaggttttctcgtgtggtttctttagtattgcttcttattttcacagctgttctaact
ggtgctgtaaaagcttctctcaatgacaaacctgtgggatttgcatccgtgccgacggcg
gatttaccggagggtacagttggtggactaggtggtgagatcgtttttgtcagaacagcg
gaagaactggagaaatacacaacagcagaaggaaagtacataatagtcgttgatggaacg
atcgtttttgaaccaaagagagaaattaaagttctttcaaacaaaacgatcgtgggaata
aacgatgcaaagatagtcggtggtggccttgtgataaaggatgcccagaatgtgatcata
agaaatattcattttgagggtttttacatggaggacgatcctcaaggtaagaagtatgat
ttcgactatatcaatgcagaaaattctcatcatatttggatcgaccactgtacctttgtc
aatggcaacgatggtgcagtggatattacaaaatactcaaactatatcactgtttcatgg
tgtaaatttgtggatcacgacaaagtctccctcgttggttcctccgacaaagaagatcct
gaacaggcagggcaggcttacaaggtcacgtaccaccacaactacttcaagaactgtatt
cagagaatgcccagaattagatttggaatggcacacgtgttcaacaacttctacagcatg
ggcctgagaacaggtgtctctggaaacgtcttccccatttacggtgttgcttcagcgatg
ggagcgaaagtccacgttgaaggaaactacttcatgggatacggtgctgtgatggcagag
gcgggaattgcgttccttcccaccagaatcatgggtcccgtggaaggttatctgacgctc
ggtgaaggagatgcaaagaatgaattttactactgtaaagaacctgaagtgcgtcctgtt
gaggaaggaaaacccgctctcgatccacgcgagtactacgattacacgcttgatccagtt
caagatgttccaaaaatcgtcgtggatggagcaggagcagggaaactgatgtttgaagaa
ctaaatacggctcagtaa
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