Thermococcus paralvinellae: TES1_1193
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Entry
TES1_1193 CDS
T03005
Name
(GenBank) ERCC2/XPD/Rad3-related DNA repair helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ths
Thermococcus paralvinellae
Pathway
ths03022
Basal transcription factors
ths03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ths00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TES1_1193
09124 Replication and repair
03420 Nucleotide excision repair
TES1_1193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ths03021
]
TES1_1193
03400 DNA repair and recombination proteins [BR:
ths03400
]
TES1_1193
Enzymes [BR:
ths01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
TES1_1193
Transcription machinery [BR:
ths03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TES1_1193
DNA repair and recombination proteins [BR:
ths03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TES1_1193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
Helicase_C_2
DEAD_2
ResIII
DEAD
SNF2-rel_dom
AAA_35
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AHF80575
UniProt:
W0I7Z3
LinkDB
All DBs
Position
complement(1138232..1140160)
Genome browser
AA seq
642 aa
AA seq
DB search
MSDYFPYKSLRPNQEEFIRLVDEAVRKGENLVIEAPTGFGKTISVLAGVLPYALSMGFKV
VYLARTHKQMDRVIEELKEINKINPVSGVEFRSRKELCLHSYIQNFAPDAYNAMIVCKNL
KKLHKCDYFENVKKKKDEFNEIVEYFRNSPSQPIEILQYSQLLELCPYEVTRKVGEKANV
IVASYLYMLNPIIREAFIESLGVDYEDLIVIFDEAHNLPNQAIDVLSDKITLNSITRAIK
EAEEYNEHEIANFLGIFLKGLENLYNERLKDREVEEAPVLPESIFAHVFNILNISERLLV
RILREMVEVGDAIREDKIEKNKPPRSYVGRVGEFLLNWLSVIGREDYLFIMSKDKGFSLE
LVALDPSRALDFINDVQSAIFMSGTLTPLEAFKDIMGIENAKLKKFPRMVKKENALVLVA
KDVSTRGEGRNLELYRKMAEYIVEAAKLIPKNVGVFTASYEVLQGLLSANVHLRIEEEVG
KKVFIEKKNASSKGNDILVRAFKEEAKREGGVLLGVMGGRNSEGQDYSGDEMNGVVLVGI
PYARPTPRVQAQIRYFEKKFPRKGRYYGYYLPAHRKLVQAAGRVHRSAEEKGAIIILDYR
VLWSSIRKDLPDWMNETIKPVNLPRMKLYLRRFYRNLEEEKN
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattacttcccctataaatcactgcgtccaaatcaagaggagttcattaggtta
gttgatgaggcagttagaaaaggagagaatttagtaattgaagctccaactggttttgga
aaaacaataagcgttcttgctggagtgttaccttatgccttgagcatgggttttaaggtt
gtttatctagccagaactcataaacagatggatagggttatagaggaactcaaggagata
aataagataaaccccgttagcggtgtagagtttagaagcagaaaagagctctgcctccac
tcttacattcaaaactttgctcctgatgcttacaatgccatgattgtgtgtaaaaacctc
aaaaagctccacaagtgtgactactttgagaacgttaagaaaaagaaagatgaatttaac
gagattgttgaatacttcagaaattccccttcccagccaattgagattctccagtactcc
cagctcttagagctttgtccttatgaagttacaaggaaagtaggagaaaaggcgaatgtg
attgttgcgagctacctctacatgctcaatccaattattagagaggccttcattgagagt
ttaggagttgattatgaggatttgatagtaatttttgatgaagctcacaacttaccaaat
caagctattgacgttttaagcgataagataacccttaacagcataaccagggcgataaaa
gaggctgaagagtataacgagcatgagattgcaaactttttgggcatcttcttaaaaggg
ctggagaatctctacaatgagcgtttaaaggatagggaagttgaggaagctcccgttctt
ccagaaagcatatttgctcatgtttttaatattcttaatatcagtgagagacttttagtc
aggattttgagagagatggttgaggtaggagatgcaattagagaagataaaattgagaag
aacaagcctccacgttcttatgttggaagagtcggggaatttctgttgaactggctttct
gtaattggtagggaggattatctctttataatgagcaaggataagggtttttcccttgaa
ttggtcgctttagacccttctagggctttggatttcataaacgatgtgcaatcggctatt
ttcatgtccggaacgctgacacctcttgaggcttttaaagacattatgggaattgagaat
gcaaagcttaaaaagttcccgaggatggttaagaaagagaatgctcttgtcttagtcgct
aaggacgtctcgacgagaggagagggaaggaatttagagttatacagaaaaatggctgaa
tacattgttgaagcggcaaagctcattcccaagaatgttggtgtttttacggcttcatat
gaagtccttcaaggtctcttatccgccaacgttcatttgagaattgaggaagaggttggc
aaaaaggttttcattgagaagaagaatgcaagctctaaggggaatgacattttggttaga
gcatttaaagaggaggcaaaaagagagggtggagttttgttaggggttatgggtggtagg
aacagtgaaggacaggattattcgggagatgaaatgaacggtgttgttctggtcggaatc
ccatatgcaaggcctactccgagagttcaagctcaaataaggtattttgaaaagaagttc
ccaagaaagggaagatactacggttattatctgccggctcacagaaagcttgttcaagcg
gctggaagagttcatagaagtgccgaagagaaaggagcaataattattctggactaccgc
gttctttggagctcgatacgaaaagatttacccgattggatgaacgaaactataaaaccc
gttaatctgccgagaatgaagctctatttaagaaggttttacagaaatttggaagaagag
aaaaactga
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