Thalassotalea sp. HSM 43: E2K93_16640
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Entry
E2K93_16640 CDS
T05926
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
tht
Thalassotalea sp. HSM 43
Pathway
tht03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E2K93_16640 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tht03400
]
E2K93_16640 (uvrB)
DNA repair and recombination proteins [BR:
tht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E2K93_16640 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E2K93_16640 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QBY05889
UniProt:
A0A4P7JPT1
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All DBs
Position
3797705..3799708
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AA seq
667 aa
AA seq
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MSKDFQIVSDYKPSGDQPTAITQLLDGIDSGLAHQTLLGVTGSGKTFTVANVIATQNRPT
MILAPNKTLAAQLYGEMKEFFPHNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASINEHIE
QMRLSATKALMERRDVIIIASVSAIYGLGDPDSYLKMMLHLRQGDIINQRDILRRLAELQ
YTRNDVAFQRATYRVRGDVIDIFPAESDRLALRIELFDEEVERISHFDPLTGEIENILPR
VTVYPKTHYAPPRERILKAVEHIKVELKERSQQLKDNNRLVEEQRIVQRTQFDIEMMTEL
GYCSGIENYSRYLSGRQPGEAPPTLFDYLPDDGLLIIDESHVTVPQLGAMYKGDRSRKEN
LVEYGFRLPSALDNRPMKFDEFSALAPQTIYVSATPSTYELEKSGDEVAEQVVRPTGLLD
PEIEVRPVETQVDDLLSEIRIRVAKNERILATTLTKRMAEDLTDYLSEHGVKTRYLHSDV
DTVERMEIIRDLRLGKFDVLIGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLEGRAILYADRITGSMKRAIDETDRRRAKQQAHNEQHGITPKGLVKKIADVMGVD
TTVKGAAALGQVAAPQADAEYLSTQDIDKKVAALENEMFEHARNLEFEKAAACRDEISKL
RDQQLAS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagattttcaaatcgtttcagattacaaacctagcggtgaccaaccaaccgcg
attactcagttattggatggcatcgactctggtttagcgcatcaaaccttactcggtgta
acaggctccggtaaaacctttaccgttgccaatgtcattgccacacaaaatcgaccgacc
atgatcttagcgcccaataaaacattggcggcgcagttatacggtgaaatgaaagagttc
tttccgcacaatgcggtcgaatattttgtgtcctattacgattactaccaacctgaagcg
tatgtgccaaccacagacacctttatcgaaaaagatgcgtcaataaacgaacatattgag
cagatgcgtttatcggcaaccaaggcgttgatggagcgtcgcgatgtgatcattatcgcc
tcggtgtctgctatatacggtttgggtgatcccgactcgtacttaaaaatgatgttgcac
ttaagacagggcgacattattaatcaacgcgatatattacgtcgcttagcagagttgcaa
tacactcgcaatgatgttgcctttcagcgcgcgacttatcgtgtgcgtggtgatgtgatt
gatatattccctgcagaatccgaccgattggcattgcgtattgaactgttcgatgaagaa
gtcgaacgaatcagtcattttgacccactaaccggtgaaatagaaaatatcttgccacgg
gtcacggtttaccctaaaacccactatgcaccccctagagagcgaattcttaaagccgtt
gagcatataaaagtcgaattaaaagagcgttcgcaacaactaaaagataataatcgtttg
gttgaagagcaacgcattgtgcaacgtacgcaatttgacatcgaaatgatgaccgagttg
gggtattgctctggtatcgagaattactctcgctatttgtcaggacgccaaccgggtgaa
gcgccaccaacattgtttgactacctacccgatgatggcttgctcatcattgatgagtcg
catgttaccgtaccgcaattaggcgccatgtataaaggtgaccgttcacgcaaagaaaac
ctagtagagtatggctttcgcctgccgtcagcgctagataatcgaccgatgaaattcgat
gaattttcggcattagcaccgcaaaccatttatgtatcggcgactcctagcacctatgag
ttggaaaaaagtggtgatgaggttgccgagcaagttgtacgtccaactgggttactcgat
cctgagattgaagttcgtccagttgaaacacaagttgatgatttattgagtgaaattcgc
atccgagtggcaaaaaatgagcgcatattagcgaccacattgaccaaacgtatggcggaa
gatctaaccgattatctaagcgaacatggcgttaaaacacgttacttgcattctgatgtg
gacaccgtagagcgtatggaaatcattcgtgatttacgtttgggtaagtttgacgtgctc
attggtattaacttattgcgagaaggtttggatatgcctgaagtttctttggtggcgatt
ctcgatgccgacaaagaaggtttcctgcgttcagagcgctcattgattcaaaccattggt
cgagcagcgcgtaatttagagggcagggctattttatacgctgaccgaattaccggctct
atgaaacgtgccatagacgaaaccgatcgtcgtcgagctaaacaacaagcgcacaatgaa
caacatggtattacgcctaaaggattggtgaagaaaattgccgatgttatgggggttgat
accacggttaaaggtgccgcagcgcttggtcaagtggctgcaccacaagccgatgccgaa
tacttatcaacgcaagacatcgataagaaggtcgctgcgctagaaaatgaaatgtttgag
cacgctcgcaaccttgagtttgaaaaggctgctgcgtgcagagatgaaatctcgaagctc
agagaccaacaattagcttcataa
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