Thauera humireducens SgZ-1: AC731_004520
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Entry
AC731_004520 CDS
T04211
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
thu
Thauera humireducens SgZ-1
Brite
KEGG Orthology (KO) [BR:
thu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thu03016
]
AC731_004520
Enzymes [BR:
thu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
AC731_004520
Transfer RNA biogenesis [BR:
thu03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
AC731_004520
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
MDMPI_C
Motif
Other DBs
NCBI-ProteinID:
AMO36264
UniProt:
A0A127K3T2
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All DBs
Position
968487..969050
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AA seq
187 aa
AA seq
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MPDAGAAGAAPRLRVFFALWPDAPTASCLHCEARQLQGACGGRLMRPDTIHLTLAFLGDT
PVSRLPILAEAAAQVHAPPCTLVLDRCGSWHGNRVLWLGPSSPPEPLGLLAGQLGSALRE
RGVALERRPFAPHVTIVRNALHAPPAQQVAAITWDVSAFVLVASERGPDGARYRELGHWP
LGEDAAR
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatgcaggcgcagccggtgcggcgccgcgcctgcgcgtgttcttcgcgctatgg
cccgacgcaccgaccgcgtcctgcctgcattgcgaagctcgccaactgcaaggtgcgtgt
ggtggacggctcatgcggccggacacgatccacctgaccctggcctttctcggcgatacg
ccggtgtcgcgcctcccaatacttgccgaagccgcggcgcaggtgcacgcgccaccctgc
acactggtgctcgaccgatgcggaagctggcacggcaaccgcgtgctctggcttggaccg
agcagcccgcctgagccattgggcctgctggccggacagctgggcagcgccctgcgtgaa
cgtggcgttgcgctcgagcgccgtcccttcgcgccacatgtgaccatcgtgcgcaatgcc
ttgcacgcaccaccggcgcagcaggtcgcggcgatcacctgggatgtgtccgccttcgtg
ctggtggcgtcggaacgcggcccggacggtgcgcgctatcgggaactcggccattggccg
cttggcgaagacgctgcgcgttga
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