Thauera humireducens SgZ-1: AC731_015560
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Entry
AC731_015560 CDS
T04211
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
thu
Thauera humireducens SgZ-1
Pathway
thu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AC731_015560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thu03400
]
AC731_015560
Enzymes [BR:
thu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AC731_015560
DNA repair and recombination proteins [BR:
thu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AC731_015560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
SH3_13
Helicase_RecD
DEAD
UvrD-helicase
AAA_22
AAA_16
SLFN-g3_helicase
MukB
RecD_N
AAA_28
AAA_25
nSTAND3
CbiA
AAA_23
AAA_29
Terminase_6N
DO-GTPase1
FtsK_SpoIIIE
AAA
T2SSE
ATPase
SRP54
UvrD_C
Flavi_DEAD
ResIII
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AMO38230
UniProt:
A0A127K8D7
LinkDB
All DBs
Position
3337070..3339058
Genome browser
AA seq
662 aa
AA seq
DB search
MNDLADGFARHLLAWADALQAPAASRAVLASAARRLALATSAGHVCIPLAALIEGGGAGE
TAHEMPTALAAEMDGDLAPADEQSDADWTLLPWAGEASAPQFADELRHRLLASGVVVEAA
QAIAGASAHPLVLDSSDRLYLRRHFDQERALARALVARAPRAAAPVKPPPLLETLFPPRA
ASTPDWQKLAVALALQGRLTVISGGPGTGKTTTVAALLACLLESQPALRVALAAPTGKAA
ARMLEALRQRAQTLPAALVARLPTEAFTVHRLLGVTPDPGRFRHHAGNPLAVDVLVVDEA
SMLDLALATRLVDALPPEARLVLLGDKDQLAAVEAGAVFAELSAQCVYSMPMRTHLAQLD
PAAGAALEGPQDTGVASGDAVAPLADAVVWLTESHRFRADSGIGRLAADIRAGRGDAALA
WLRTGEDVSACWIEDPGTQLGTVARARVEAGFTPYVALLREGLGARTAGSAPGTVDVAAA
TRAFERFRVLVAVREGGRGLAALNAHLEAHLRAALGLPPERSAVARWYPGRPVIVLANDY
RLGLFNGDIGLCLPDGQGELRVFFAAADGGFRAIPPLRLPAHDTAFALTVHKSQGSEFDE
VLLVLPAEPVRVLTRELIYTGVTRAAKRVTVAGAGDVFAAGCAARTLRASGLRDRMREAA
RA
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatctcgccgacggcttcgcccgccacctgctcgcctgggccgatgcgctgcag
gccccggccgccagccgcgcggtgctggccagtgcggcgcgccggcttgcgctggcgacc
agcgcgggccatgtctgcattccgctggcggcgcttatcgaaggcggtggcgcgggggag
accgcgcacgagatgccgaccgcgctcgcggcagagatggacggggacctcgcgccagcg
gacgagcagtccgacgccgactggacgctcctgccgtgggctggcgaagcgtcggctccg
cagttcgcggacgagctccgccaccgcctgctggcgagcggtgtggtggtcgaagccgcg
caggccatcgcgggcgcgtcggcgcatccgctggtgctcgacagcagcgaccggctctac
ctgcgccgccatttcgaccaggagcgggcactggcgcgggcgctggtggcgcgcgcgcca
cgcgccgctgcgccggtgaagccgccgccgctgctcgagaccttgttcccgccccgtgcc
gcgtccacccccgactggcagaagctcgccgtcgcgctggcgctgcaggggcggctcacc
gtcatcagcggcgggccgggcacgggcaagaccaccaccgttgcggccctgctcgcctgc
ctgctcgaaagccagccggcgctgcgcgtcgcgctggccgcgcccaccggcaaggccgcg
gcacgcatgctcgaggcgctgcgccagcgcgcgcagaccctgcccgcggccctcgtcgcc
cgcctgccgaccgaggccttcaccgtgcaccgcctgctcggcgtcacgcccgatccgggt
cgtttccgccaccatgccggcaatccgctggcggtcgatgtgctggtggtggacgaggcc
tcgatgctggacctcgcgctcgccacccgtctggtcgatgccctgccgcccgaggcgcgg
ctcgtgctgctgggcgacaaggaccagctcgccgcggtcgaggctggtgcggtgttcgcc
gagctgtcggcgcagtgcgtctattccatgccgatgcgtacgcatctcgcgcagctcgat
ccggctgccggcgcggcgctggagggcccgcaggacaccggggtggcgagcggggatgcc
gttgcgccgctggccgacgcggtggtgtggctgacggagagccaccgcttccgcgccgat
tccggcatcggccggctggcggccgacatccgtgccgggcggggcgatgcggcgctggcc
tggctgcggacaggcgaggacgtctcggcctgctggatcgaggatcccggtacgcagctg
gggaccgtggcgcgggcgcgcgtcgaggccgggttcacgccctatgtcgccctgctgcgc
gaaggcctgggtgcccgcacggccggaagcgctccgggaacggttgacgtggccgcggcc
acccgcgccttcgaacgcttccgcgtgctggtggcggtgcgcgagggcgggcgcgggctg
gccgcgctgaatgcccatctcgaagcccacctgcgggcggcgctcggcctgccgccggag
cgcagcgcggtggcgcgctggtatccgggacggccggtcatcgtgctcgccaatgactat
cgcctcggcctgttcaacggcgacatcggcctgtgcctgccggatgggcagggcgagttg
cgggtgttcttcgccgccgcggacggcggcttccgcgccatcccgcccctgcgcctgccg
gcgcacgacacggcgtttgcgctgacggtgcacaagagccagggctcggagttcgacgag
gtgctgctggtgctgccggccgagccggtgcgcgtgctgacgcgcgagctgatctacacc
ggcgttacccgtgccgcgaaacgggtgacggtggccggggcgggcgatgtcttcgccgcc
ggctgtgcggcccgcacgctgcgggcctcgggcctgcgcgaccgcatgcgcgaggcggcg
cgggcatga
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