Thermoflexus hugenholtzii: KNN16_03125
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Entry
KNN16_03125 CDS
T07254
Name
(GenBank) GAF domain-containing protein
Organism
thug
Thermoflexus hugenholtzii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GAF_2
GAF
GAF_3
Response_reg
HATPase_c
HisKA
PAS
PAS_4
PAS_8
PAS_9
PAS_7
DUF3369
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
QWK11278
LinkDB
All DBs
Position
complement(662992..668964)
Genome browser
AA seq
1990 aa
AA seq
DB search
MGWARLRRFLGGRSPRPAAAAAEASFLDRWAEPVLWVEAGSGRVFLNAAARARLGDPPPA
SRQDLEARLQPLGVLERWLRGSSEPALVNGQRVHARVLPLSLDGHPGHFIVLQIAPEAPV
PSPLIPQSRELALVTGIARLLGASLDLESTLDAILFAIRQVIPYDLAEIHLWEPGERRLR
TRARDGDPQVVAQLAQGSDLHRPEEGLTGWLFAHRRPLRIEDLQRFTEARPRAPLAALPF
RAFLGIPLQAGEELVGTLELCAYRPGAFTEDHLRLLEAIGAQAAIAIHNVRLYEATRQYA
EGLETLFRIAAMSAISRSLEEFLRPAVAELARWFRVERVVVLLYDPKRQELAPHPAGVHG
PWSPEDLRFRLPVGDPVFAESVFRSGRPFRSNRAPEDRRVIPPYRELIARFGVQSVLSIP
LMAREQPIGEVHLINRLESRFTREDERLGMAMGVILGTTLHNLQLIERAQRRAARMRTLM
EIGQRIAATLDLDTLFETIREELGRILDARNFYAALYDPENDEVSFVFYVHRGERLTERP
KRRGGRGLTEYVLRTGRPLLLRGDVMEQARALGIEPVGSPARLWMGVPMRRGDRVIGMIA
VEHEEEDAFDEEDLELLQAIAHHAAIAVENARLYGEVRERLEARIQQLLALNRIGQELNA
NLDLDHILNLVLGSAMQVTGADYGMILLHDPQHDLLRPRLLRHLTLEHLQARGLDRQRPG
EGLIGQAFQTGRVLLVRDVRQDPHYLPGTPDTLSEVAVPIWYGTLVVGVLDLQSRQVDGF
REEQIAFLEALAAQAAVAIGNALRLQEEAQRSERYRQRIELMRGMLEVSQALRAEHPLEN
ALDAIAHTIRESLGFERVLISLIEGEPPVLRRVAQAGLPLPVFERMRRITQPWRNMQQLL
REEFRLGTCYYIPYERQPENLTDLLDTWTATPTREPRPDPTRWHPEDLLIVPIYGTGGHL
LGIISVDEPRDGRAPTREIAEMLELLASQTGIIIENARLYESLTARIEELTRLNEASRLI
AARLEPGTLLEAIAQAAATLSRAAWAAVLVPGPTGSPQIQARFPSEAAPTGPSPEDLLDP
AWVDQAWRSGRALYLRDLTEILETEGEGIRSLLLLPMRTAGRTDGLIAVAHPDRGAFDEA
EQILLQTLAEQAAVALENARLYEQTRRFSEELEQLVRERTEALEKALTDLSARHRQLELL
YQATLALTASLELEATLRQALSLLTEEGETAAVILLDPESGRLQVRAGVGPGSAHLLGAS
WSLREDPGLVRDAIRQRRTQCPEAVSPERLPPAWQNLRLQSAVAIPLVLGFDVLGVMVLT
HPQPGRFRMERIQLLETVGAQMAQAIHNAALYHLITQQAEQLGNTLRAAQEEASKRQAIL
ESIAEGVMVADARGEVIMMNAAAERILGLRREEVLGRPIRHFTGLYGPAWQEWMASLRRW
LSAPHGQPPTLFMRHELEPEGRFITVHAAPVMMGTEFLGIVSVFRDITAEVEADRAKAEF
ISTVSHELRTPMTSIKGYVDLLLMGSAGPLSEMQRRFLQIVRANADRLKMLVDDLLDISR
IESGRLQLDLRPVPLEAAVEAVILSLKARLDEKRQQLEVDLPDALPPVMADKDRLIQILM
NLVSNAHKYTPEGGWIRIRARPQGEMVRVEVQDTGIGIPPEALPRIFERFYRVDDPRVQE
TPGTGLGLSIVKALVELHGGQIGVESEVGKGSTFYFTLPIARPAVSLPEPEPGARPAPQA
QTDGTAPILIVEDDRHIADLLVQHLERAGYRTLVAHRGEDALRLAREERPQLITLDIYLP
DVDGFTVLERLKADPATAEIPVIIVSVLADRQRGVRLGAVDVLGKPVDADRLLEVVAQYA
RRHARIVIVDDDAGTRALLQDTLRGHGFEVIAFGNAQEALAWIEDHHPDLVLLDLKPAGL
SGLDALARLKANPKTADIPVVIMTASATDPMGKRRQALAMGAADFFLKPFPLEEFVAAIR
RLLAAQPESE
NT seq
5973 nt
NT seq
+upstream
nt +downstream
nt
atggggtgggcgcgtttgcggagattcctgggaggaagatcccctcgccccgcggcggcc
gccgcggaggcctctttcctggatcgctgggcggagccggtcctgtgggtggaggccggc
agcggtcgggtgttcctgaacgccgccgcccgggcgcgcctgggagatcctccgccggcc
tcccgacaggatctggaagcccgcctccagcccctcggagtcctggaacgctggctgcgg
ggctcgtcggaacccgccctcgtgaacgggcagcgcgtgcatgcccgcgtcctccccctc
tccctggacggacatcccggtcacttcatcgttctgcagatcgccccggaggctcccgtc
ccctccccgctcatccctcaatcccgtgagctggccctggtgacggggatcgcccgtctg
ctcggcgcttccctggatctggaatccaccctggacgcgatcctgttcgcgatccggcag
gtgatcccctacgacctggcggagatccatctgtgggagcctggagagcggcgcctgcgc
acccgagcccgggatggggatccccaggtcgtggcccagctggcccagggcagcgacctc
catcgcccggaggagggcctcaccggttggctgttcgcccaccgacgccccctgcggatc
gaggatctccagcgcttcaccgaagcccgtccccgcgcgccgctggctgcccttcccttc
cgggctttcctggggatccccctgcaggcgggtgaggagctggtagggaccctggagctg
tgcgcctatcggccgggcgctttcaccgaggaccatctgcgcttgctggaggccatcggc
gcccaggccgccatcgccatccacaacgtccgcctctacgaagcgacccgccagtatgcg
gaagggctggagaccctgttccgcatcgccgccatgagcgccatctcccgctccctggag
gagttcctccgcccggccgtcgcagagctggcccgctggttccgggtcgagcgggtggtg
gtgctgctctacgatccgaaacgccaggagctggctccccatcccgcgggggtccacggg
ccgtggtcgccggaggacctgcgtttccggctgccggtgggcgatcctgtgttcgcggag
agcgtgttccgcagcgggcggcccttccgctccaaccgggcgccggaggaccgtcgggtg
atcccgccttaccgggagctcatcgcccggttcggggtccaatcggtcctctccatcccc
ctcatggcccgggagcagcccatcggcgaggtccatctgatcaaccgcctggaaagccgc
ttcacgcgggaggacgaacggctggggatggccatgggggtgatcctggggaccaccctg
cataacctccagctgatcgagcgggcccagcgccgcgccgcccgcatgcggacgctgatg
gagatcgggcagcgcatcgccgcgaccctggatctggacacgttgtttgagacgatccgg
gaggagctcgggcggatcctggacgcgcggaatttctacgccgccctctacgacccggag
aacgatgaggtctccttcgtgttctacgtgcatcggggggaacggctcaccgagcggccg
aagcgacgcggcggccgcggcctgaccgagtatgtgctccgaaccggccggcccttgctg
ctgcggggagatgtgatggagcaggcccgcgccctgggcatcgagcccgttgggtcccct
gcccggctctggatgggcgtgcccatgcggcggggcgaccgcgtcatcggcatgatcgcg
gtggagcacgaggaagaggatgcctttgacgaagaggacctggagctgctgcaggccatc
gctcaccatgcggccatcgcagtggagaacgcccggctttatggagaagtgcgggaacgg
ctggaagcccgtatccagcagctgctggccctcaaccgcatcgggcaggagctgaacgcg
aacctggatctggatcacatcctcaacctcgtgctgggctccgccatgcaggtcaccggg
gcggattacgggatgatcctgctgcatgacccgcagcatgatctcctgcgcccgcgcctc
ctgcgccacctcaccctggagcatctgcaggcccgaggcctcgaccgccagcggcccggc
gaggggttgatcggccaggccttccagaccggccgggtcctgctggtgcgggatgtccga
caggatccccactacctcccggggacaccggacaccctgtccgaggtcgccgtccccatc
tggtatggcaccctggtggtgggcgtcctggatctccagagccgccaggtggacggcttc
cgggaggagcagatcgccttcctggaagccctggccgcccaggccgcggtggccatcggc
aacgcgttgcgcctgcaggaagaagcccagcggagcgagcgctaccgccagcgcatcgaa
ttgatgcgcgggatgctggaggtcagccaggccctgcgcgccgagcaccccctggagaac
gccctggacgccatcgcccacaccatccgggaatccctgggattcgagcgcgtcctcatc
agcctgatcgaaggagagccacccgttctgcgtcgagtggcccaggccgggctccccctc
cccgttttcgagcggatgcgccggatcacccagccctggcgcaacatgcagcagctcttg
cgggaggagttccgcctggggacctgttactacatcccctacgagcggcaacccgagaac
ctcaccgacctgctggacacctggaccgctacgccgacgcgggagccacggccggatccc
acccgctggcacccggaggacctcctcatcgtgccgatttacggaacgggtgggcacctc
ctggggatcatctcggtggacgagccccgggatgggcgggcgccgacccgcgagatcgca
gagatgctggagctgctcgccagccagaccggcatcatcatcgagaacgcccgtctgtat
gagagcctgacggcgcggatcgaggagctcacccgtctcaacgaagccagccggctgatc
gccgcgcgcctggagccgggcacccttctggaggccatcgcccaggccgcggcgacgctg
agccgggcggcctgggccgccgtgctggtgcccggaccgaccggatccccccagatccag
gcccgctttccatccgaggccgcgcccacaggcccctctccggaggacctcctggacccg
gcgtgggtcgatcaggcgtggcgctcggggcgggccctctacctgcgcgatctgacggag
atcctggaaaccgaaggggaggggatccgctccctgctcctccttccgatgcgcaccgcc
ggacggacggacgggctgatcgccgtggcccacccggaccgaggggccttcgacgaggcg
gagcagatcctgctccagaccctggcggaacaggcggccgtggccctcgagaacgcccgg
ctctacgagcaaacccgacgcttcagcgaggagctggaacaactggtccgcgagcgcacc
gaggcgctggagaaagccctaacggacctctccgcccgccatcgccagctggagttgctc
tatcaggctaccttagccctcacggccagcctggagctggaggcgacgctccgacaggcc
ctttccctgctcaccgaggaaggggagaccgccgccgtgatcctgctggatccggagtcc
ggccgcctgcaggtgcgggccggggtcggtccgggaagcgcccatctgctcggggcctcg
tggtcccttcgggaggaccccgggctggtgcgggacgccatccgccagcggcggacgcaa
tgcccggaggcggtctcgccggagcgcctgcctcccgcctggcagaacctgcgcctgcag
tccgccgtggccattcccctcgtcctgggcttcgatgtgctgggcgtcatggtgctgacc
catcctcagcccggccgcttccgcatggagcgcatccagctgctggagaccgtgggagct
cagatggcgcaggccatccacaacgcggccctctatcacctgatcacccagcaggcggaa
cagctgggcaacaccctgcgggccgctcaggaggaggcctccaagcgccaggcgatcctg
gagtccatcgccgagggcgtgatggtggccgacgcccggggcgaggtgatcatgatgaac
gcggccgccgagcgcatcctgggcctgcgccgagaggaggtcctcggccgtcccatccgc
cacttcaccggcctctacggcccggcctggcaggaatggatggcctccctccggcgctgg
ctctccgctccccatggccagccccccaccctcttcatgcgccacgagctggagccggag
ggccgcttcatcaccgtccacgccgccccggtgatgatgggcaccgagttcctgggcatc
gtatcggtcttccgggacatcacggctgaggtggaggccgaccgcgccaaagccgagttc
atctccaccgtctcccatgagctgcgcactcccatgacttccatcaagggctacgtggat
ctgctgctgatggggtccgcaggccccctctccgagatgcagcggcgcttcctccagatc
gtccgcgccaacgccgatcgtctgaagatgctggtcgacgatctgctggacatctcccgc
atcgagagcgggcgtctccagctggacctccggccggtccccctggaggccgccgtggag
gccgtgatcctctccctcaaagctcgcctggatgagaagcgccagcagctggaggtcgac
cttccggacgccctcccgcccgtgatggccgacaaggaccgcctgatccagatcctgatg
aacctggtcagcaacgcccacaaatacacgccggagggagggtggatccggatccgcgcc
cggccccagggggagatggtccgggtggaggtccaggacaccggcatcgggatcccgccg
gaagccctcccccgcatcttcgagcgcttctatcgggtggacgacccccgcgtccaggag
acgccggggaccggcctgggcctctccatcgtgaaggcgctggtggagctgcacggtggg
cagatcggcgtggagagcgaggtgggcaaaggctccaccttctacttcacgttgcccatc
gcccggccggccgtgtccctgccggagccggagccgggcgcccgacctgctccccaggcc
caaaccgatggaaccgcccccatcctcatcgtggaggacgaccggcacatcgccgatctg
ctggtgcagcacctggagcgggccggctaccgcaccctggtcgcccaccggggcgaggac
gccctccgcctggcccgggaggagcgccctcagctgatcaccctggacatctacctgccg
gacgtggatggcttcaccgtgctggagcgcctgaaggcggatccggccactgcggagatc
ccggtgatcatcgtctccgtcctggccgaccgccagcggggggttcgcctgggggccgtg
gacgtgctgggcaagccggtggacgcggaccggctgctggaggtcgtcgcccagtatgcg
cggcgccacgcccgcatcgtcatcgtggacgacgatgcgggaacccgggcgttgctccag
gacaccctgcgaggccatgggttcgaggtgatcgccttcgggaacgcccaggaggccctg
gcctggatcgaggatcatcacccggatctcgtgctgctcgatctcaagcctgcggggctg
agcgggctggacgccctggcccgcctgaaggccaacccgaagaccgcggacatcccggtg
gtgatcatgaccgccagcgccacggatcccatgggcaagcgccggcaggcgctggccatg
ggggcggcggatttcttcctcaaacccttcccgctggaggagttcgtcgccgccatccgg
cggctgctggcggcccagccggaaagcgaataa
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