Thermoanaerobacter sp. X513: Thet_1718
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Entry
Thet_1718 CDS
T01317
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
thx
Thermoanaerobacter sp. X513
Pathway
thx03030
DNA replication
thx03430
Mismatch repair
thx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Thet_1718
03430 Mismatch repair
Thet_1718
03440 Homologous recombination
Thet_1718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thx03032
]
Thet_1718
03400 DNA repair and recombination proteins [BR:
thx03400
]
Thet_1718
Enzymes [BR:
thx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Thet_1718
DNA replication proteins [BR:
thx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Thet_1718
DNA repair and recombination proteins [BR:
thx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Thet_1718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
ADN55299
LinkDB
All DBs
Position
complement(1682775..1686212)
Genome browser
AA seq
1145 aa
AA seq
DB search
MFVHLHVHSEYSLLDGSCRIKDLIAKTKELNMKAIAITDHGVMYGVIDFYKEAVAQGIKP
IIGCEIYVAPRSMQDREYGIDNENYHLVLLAKDMTGYKNLMKIVTVASIEGFYYKPRVDR
EFLKEHSEGLIALSACLAGEVPSYILRGEYEKAKEAALFYDSIFGRGNFYLELQDHGILE
QQKVNKELIRLSKETGIPLVATNDVHYLEKKDAKAHEVLLCIQTGKTIDDEDRMSFPTDE
FYLKSPEEMENLFSCCKEAIENTEKIADMCNVEFEFNKTKLPKYDLPEGVDSCEYLRNLC
YEGLYKRYKNPSKEVIERLDYELSVIEQMGYVDYFLIVWDFIKFAKDNGIMTGPGRGSAA
GSLVAYTLGITNIDPIKYNLLFERFLNPERVSMPDIDSDFCYERRQEVIDYVVKKYGKDN
VAQIITFGTMAARAVIRDVGRALNYLYAEVDVIAKMIPFELGMTIDKALSLNPELKARYE
NEEKVKQLIDISRSLEGLPRHASTHAAGVVISKEPLVNYVPLQKNEDSIVTQFPMTTLEE
LGLLKMDFLGLRTLTVIRDTIEMVEKNRGVTIDFDSMEYDDPKVYELISKGETEGVFQLE
SSGMKQFMAELKPKNLEDIIAGISLYRPGPMDQIPRYLANRNHPESIVYDHPLLKPILDV
TYGCMVYQEQVMQIVRDVAGYSLGRSDLVRRAMAKKKMDVMEQERKNFIYGIVDEEGNVI
VPGALRNGLDEATANKLFDEMLDFANYAFNKSHAAAYAVIAYQTAYLKRYYPVEFMAALL
NSFVDNLDKVAFYVQVCRKMGIKVLPPDINESDSYFTVVEDKIRFGLSAVKNVGLNMTME
IVSERERNGKFKSVVDFFERMQDSQLNKKAVESLIKAGAFSSFGVRRSQLLSAYDKLMEN
IKKNRNNNLNGQISLFGEVEQTHGVGFEFPDLEEFPKSRLLSMEKETLGLYISGHPLEEY
MEDIPKITNATTLDFKVSEEEMFQPKLQDNQEVVIAGVIATKKIKFTKNNNIMAFVTIED
LYGTVEVIVFPTVYEKYSSIIKEDNPVVVRGKVSLKEEEEPKILCDEIKPLSQAIVKKLY
LNLQDSTKIEIVKQILRKNPGNMPVVLKLNSKKLLAANRDLWVNGSKELIKELHAVLGEE
NVKVV
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtccatttgcacgttcattctgaatacagtttacttgacggttcttgcagaatt
aaagatttaattgccaaaactaaagagttaaacatgaaagccatagctattacagaccat
ggagtgatgtatggcgtaatagatttttataaagaagcagtagcacaaggaataaaacct
attataggctgtgaaatttatgtagcccctcgaagcatgcaggatagagaatatgggatt
gataatgaaaattatcacttggtgttactggcaaaagacatgacagggtataaaaattta
atgaagatagtgactgtggcttcaattgagggcttttattataaaccgcgagttgacaga
gagtttttaaaagagcacagtgaggggctaatcgctttaagtgcttgccttgcaggagaa
gttccttcttatatcttaagaggtgagtatgaaaaagcgaaagaggcagcacttttttac
gactctatttttggacgagggaatttttatttagaactgcaggaccatggaattttagaa
cagcaaaaggtaaataaagagcttataagactatccaaagagacgggaatacctttagtt
gctactaatgatgtacactatctcgagaaaaaagacgcaaaagctcatgaagtgctattg
tgcattcaaacaggaaagacaattgatgatgaagatcgcatgtcttttccaactgatgaa
ttttatttaaaatctcccgaagagatggagaatcttttttcttgttgtaaagaggcaatt
gaaaatactgagaagattgcagacatgtgcaatgtagaatttgagtttaataagacgaaa
ttgcccaaatacgatttgccagaaggcgttgattcctgtgaatatttgagaaatttatgt
tatgaaggattgtacaagaggtacaaaaatccaagcaaagaagtgattgaaagattagat
tacgaactttctgtaatagagcaaatgggatatgtagattatttcctcatagtgtgggac
tttataaagtttgcaaaagacaacgggattatgacgggaccaggaagaggttctgcggca
ggtagtttggtagcctatacgttgggaataaccaacatagatcctataaaatacaacctt
ctttttgagaggtttttaaaccctgagagggtcagcatgcctgatattgattcagacttt
tgttatgagagaagacaagaagtaattgattacgttgtaaaaaaatatggtaaggacaat
gtggctcaaattataacttttggtacaatggcggcgagagcggttataagggatgtagga
agggctttaaattatctctatgcagaggtagatgtaattgcaaaaatgattccttttgaa
ttgggaatgactattgataaagctttatctttaaaccctgaacttaaagcgcgatacgaa
aatgaagaaaaagtaaaacagcttattgatatttctaggtctttagaaggccttcctaga
catgcctctactcatgctgcgggagtagtaatatcaaaagaaccccttgtcaactacgtg
ccactgcaaaaaaacgaagattccatagtgacccaatttccgatgaccacccttgaagag
ttagggcttttgaagatggactttttgggactgagaactttgacggttataagggatact
attgaaatggtagaaaagaacaggggtgtgactatagattttgattctatggaatatgat
gaccctaaagtttatgaacttatatcaaaaggggaaaccgagggcgttttccaattagag
tcttctggcatgaaacagtttatggcagaattaaagcctaaaaaccttgaggacataata
gcaggaatttctctctatcgacccggacctatggaccaaattccaagatatcttgcaaat
agaaatcacccagagagtatagtctatgaccatcctcttttaaagccaattttagacgta
acttatggctgcatggtgtatcaagagcaagttatgcaaattgtaagagatgtcgctggt
tactctttaggcaggtctgacttggtaagacgagctatggctaaaaagaaaatggatgta
atggaacaagaaagaaagaattttatctatgggatagttgatgaagagggaaatgtgata
gttccaggggctttaagaaatggattagacgaggcaactgctaataaactttttgacgaa
atgttagattttgcaaactatgcttttaataaatctcatgctgcggcttatgctgttata
gcttatcagactgcatatttgaaaaggtattatcctgtagaatttatggcagctctttta
aacagttttgtagataacctggataaagtagctttttatgtgcaagtttgtagaaaaatg
gggataaaggtgctgccccctgatataaacgaaagtgattcctattttacagtggtagaa
gataaaataaggtttggccttagcgcagtaaaaaatgttggtttaaatatgacaatggaa
atcgtaagtgaaagagaaagaaatgggaaatttaaatctgtagtcgacttttttgagagg
atgcaggacagtcaattaaataaaaaagcagtggaaagcttaattaaagcaggagctttt
agttcttttggagtgcggcgttctcaacttctatcagcatatgacaaattaatggaaaat
ataaagaaaaatagaaataataatttaaatgggcaaatttctttatttggagaagtagaa
caaactcatggggtggggtttgaatttcctgatttagaggaattccctaaaagtagattg
ttgtccatggaaaaagaaactttaggcctttatataagtgggcatcctctagaagaatac
atggaagatattcctaaaattactaatgccactactttggattttaaagttagcgaagag
gaaatgtttcagcccaaattgcaagataaccaagaagtggtgatagcaggagttatagct
acaaaaaaaattaaatttacaaaaaataacaatatcatggcttttgtcacaattgaggac
ttatatggtactgtagaagtaatagtatttccaactgtatatgaaaagtattccagtata
ataaaagaagacaacccggttgtagtgaggggaaaggttagtttaaaggaagaggaagag
cctaagattttatgcgatgaaattaagccattgtctcaagcgatagtgaagaaactttat
cttaatttacaggattctacaaagattgagattgttaaacaaatattgcgcaaaaatcct
ggtaatatgccagtagttttaaagcttaacagtaaaaaattattagcggctaatagagat
ttgtgggtaaatggaagcaaagaattaattaaagaacttcatgctgtcttaggagaggaa
aatgtcaaagtagtttga
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