Thermodesulfatator indicus: Thein_0900
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Entry
Thein_0900 CDS
T01546
Name
(GenBank) putative RNA polymerase, sigma 70 family subunit
KO
K03089
RNA polymerase sigma-32 factor
Organism
tid
Thermodesulfatator indicus
Brite
KEGG Orthology (KO) [BR:
tid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tid03021
]
Thein_0900
Transcription machinery [BR:
tid03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Thein_0900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
HTH_11
TrmB
GntR
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
AEH44777
UniProt:
F8ACY3
LinkDB
All DBs
Position
complement(947001..948155)
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AA seq
384 aa
AA seq
DB search
MSTKVSESQINKDKALVELPEKEPPLAVPVSSPTEEKPKKKIKLKLKKKNIARTTKEKAQ
NTEKKEQLSLKEPKKRTEKNRSEKEALPAIPKEEKDLISYDPLQQYLKEISKYPLLTREE
EERLTKEYYETKDPKIAYRLVTSNLRLVVKIALDFQKFWMQNFLDLIQEGNVGLMQAVKK
FDPYRGVKFSYYASFWIKAYILKFIMDNWRLVKIGTTQAQRKLFYNLRKEKEKLDAMGFE
PAAKLISKRLNVKEEDVIEMEQRLSAGEVSLDAPVKEDSDELHRDFLADPNAKVEDQVAK
KEVISKLRSILEEFGKDLKDKERVIFYERLLAEEPLTLQQIGQRFGVSRERIRQIEERLL
KKLRKYLKERLPDAENYPLAIEGS
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaaaagtttcagaatcccaaatcaataaagataaagctttagttgaactgcca
gaaaaagaacctcctttggcagtacccgtttcttctcctaccgaagaaaaacctaagaaa
aaaattaagctcaagcttaaaaagaaaaatattgctagaacaacaaaagagaaggcccaa
aatacagaaaaaaaagaacagctttccctaaaagaacctaaaaagcgaacagaaaagaat
cgttctgaaaaagaagctctgccggctattcctaaggaagaaaaagatctgatttcttat
gatcctttacagcaatatttgaaagagataagcaaatatccccttctaactcgtgaagaa
gaagagcgtcttaccaaggaatattatgaaaccaaagatcccaaaattgcctatcgcttg
gtaacttctaacttgcgcctggtggtaaaaattgcccttgattttcagaaattctggatg
caaaactttctcgatctcattcaagaaggaaatgttggtttaatgcaggccgtaaagaag
tttgatccttatcggggagttaaattttcttattacgcctccttttggataaaagcctac
attttaaagttcattatggataactggcgattagtaaaaatagggactactcaggcccag
cgaaagctcttttacaatttgcgcaaggaaaaagaaaagcttgatgccatgggctttgag
cctgcggccaagcttatatccaagcgtcttaacgtgaaagaagaagacgtcattgaaatg
gaacagcgcttgagtgctggtgaggtaagtcttgacgcccctgttaaagaagattctgat
gaacttcaccgcgactttctagctgacccaaatgccaaagtggaagaccaggtagctaaa
aaagaagttatttccaaacttcgtagtattttagaggaatttggtaaagacttaaaagac
aaggaaagagttattttttacgaacgtcttttggctgaagagcctttaactcttcagcag
attggtcaaagatttggtgtatcacgtgaaaggattcgccaaatagaagaacgtttgctt
aaaaagcttagaaaatatctaaaggaaaggttaccagatgcagaaaattatcctctggcc
attgaaggttcttag
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