Tuwongella immobilis: GMBLW1_25640
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Entry
GMBLW1_25640 CDS
T06428
Name
(GenBank) atp-dependent helicase : ATP-dependent helicase HrpB OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_3120 PE=4 SV=1: DEAD: Helicase_C: HA2: HrpB_C
KO
K03579
ATP-dependent helicase HrpB [EC:
5.6.2.6
]
Organism
tim
Tuwongella immobilis
Brite
KEGG Orthology (KO) [BR:
tim00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
GMBLW1_25640
Enzymes [BR:
tim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GMBLW1_25640
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GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
HA2_N
ResIII
HA2_C
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
VTR98281
UniProt:
A0A6C2YJ07
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All DBs
Position
1:1029300..1031894
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AA seq
864 aa
AA seq
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MQSIALQANSKRIPILENQRVGLPRFPIDDVLPELIRQLRDASSVVLRAPTGAGKTTRVP
PALLDAGFADSGWIVMLEPRRVAARAAARRMASERGEPIGETIGYQVRLERVAGPRTRIL
VVTPGILLRMLQDDPFLEKIAVIVMDEFHERSLEGDLVLGMTRLVQTTVRPELKLLLMSA
TLADQRLSAYLGDCPIVRSEGRLYPVQLRYHPRRGDADLLDTARDAIERIWPETPGDLLV
FLPGVGEIRTLERELQPFAAARGVRVMPLYGDLPAEQQDLALRKFPERKIVLATNVAETS
VTVDGVTAVIDTGLARQNRFDASVGLDRLELVPIAQDSADQRAGRAGRTQPGICVRLWEE
AGHRQRPETTLPEIQRIDLSGALLHLLCLGEAKPEDFLWLDAPRSEALEQAFRLLRRLGA
VDANGVTELGRAMGRLPLHPRLARMVLDGAERGVLRSTLLAAVLLTERDPIQRRSGIRSD
RQSDVLDRLDVLEQFQRTGRTEFPVGNLVPGAARQLLRLAEQLERQLAREGVRAAERPSQ
SVEDAEVALLRALLAGFPDRVAKRREPGSRRARMVGGRGVQIGPMSGVDGPEYFLAIDVD
GGGSEALVRMASGIERSWLPESVIVVRDEVEFDEASGKIQGRRRRRYDDLILEESPIAIR
DSEAAAELLAEVAASRLEQALPDSESAAGQWLNRLRCLAEWVPDVELPRLDEAGMREILR
QVCRGCRSLDEVRQADWIGIIQGMMDYATTQWIEREAPERLEVPSGSRIALRYEPGRPPI
LAVRIQELFGLTETPRIARGRVPVLLHLLAPNYRPQQITDDLSSFWANVYPQVRKDLRAR
YPKHAWPEDPWTATAQSRPQRRPS
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcattgcgcttcaggcgaactcgaagcgaattccaattttggagaaccagcgc
gtgggactgccgcgattccccattgatgatgtgctgcctgagctgatccgccagctccgc
gatgcctccagcgtggtccttcgcgcacccaccggagccgggaaaaccacccgagtgccg
cccgcattgctcgatgccggattcgccgattccggatggatcgtcatgctcgaaccccgt
cgcgtcgcggctcgggctgccgctcgacgcatggccagcgaacgtggcgaacccatcgga
gaaaccatcggctaccaggtgcgattggaacgagtggccgggccgcgaacccgcatcctc
gtcgtcacgccggggattttgcttcgcatgctccaggatgatccctttttagagaaaatt
gcggtcatcgtcatggacgaatttcacgaacgcagcctggaaggcgacctcgtactggga
atgacgcgcttggtgcagacgacggtgcgcccggaattgaaattgctgctgatgtccgcg
acgctggccgatcaacgattgtccgcgtatctgggcgattgcccgatcgtccgcagcgaa
gggcggttataccccgtgcaactgcggtatcatccccgccgtggcgatgccgatttgctg
gataccgcccgcgacgcgattgagcggatttggcccgaaactcccggcgatctgctggtc
tttctccccggtgtcggggaaattcgcacgttggaacgcgagttgcagccatttgcggcg
gcgcgcggcgtgcgcgtgatgccgctatacggcgatttgcccgccgagcagcaggatttg
gcgctgcggaaattccctgagcgaaaaattgtgctggcaaccaacgtcgccgaaacctca
gtcaccgtcgatggcgtgacggcggtgatcgataccgggttggcgcggcagaatcggttc
gatgccagcgttggcctggatcgtctcgaattggtgccgattgctcaggactcggcggat
cagcgggccggtcgtgcgggccgaacgcaacccggcatctgcgtgcgactttgggaagaa
gcggggcatcggcaacgacccgaaaccacgctgccggaaattcagcgaatcgatctttcc
ggggcgctgctgcatctgctttgcttgggtgaagcgaaaccggaggattttctctggctg
gatgcgccgcgttctgaggcgctggagcaggcatttcggttgctgcgtcggctgggggcg
gtcgatgccaatggcgtgaccgaattgggccgcgcgatggggcgattgccgttgcatccg
cgcttggctcgcatggtgttggatggggcggagcgcggcgtattgcgcagcacgctgttg
gcggctgtgttactcacggagcgcgatcccatccaacgacgttcgggaatccgcagcgat
cggcaatcggatgtcttggatcgtctggatgtgctggagcaattccaacgcacgggccga
acggaatttcccgtgggcaatctggtgcctggagcggcgcggcaactgttgcgactcgcc
gagcaactcgaacgccaactggcgcgagaaggtgtgcgagcggcggaacgtccatcgcaa
tccgttgaagatgcagaggttgcgctgttgcgggcattgctggcgggattcccggatcga
gtcgccaaacggcgcgaacccggaagccggcgggcgcggatggtgggtggtcgcggcgtg
cagattgggccgatgtctggtgtggatgggccggaatatttcctggcaatcgatgtcgat
ggcggcggcagcgaggcactcgtgcggatggcttcgggaatcgaacgatcgtggctgccg
gaatctgtcattgtcgtgcgggatgaggtcgaattcgacgaagcgagtggcaaaatccaa
gggcggcgtcggcggcgctacgacgatttgatcctggaggaatccccaatcgcgatccgc
gattccgaagccgccgccgagttactcgccgaagtggccgcatcgcgcttggaacaggcg
ttgcccgacagcgaatccgccgcagggcaatggttgaatcggctgcgatgtctggccgaa
tgggttcccgatgtcgaactgccacgtttggacgaagccggaatgcgcgagattctgcgt
caggtctgtcgggggtgtcgctcgttggacgaggttcgccaagccgattggatcggcatc
attcaggggatgatggattacgcgacgacgcaatggatcgagcgcgaagcccccgagcgg
ctcgaagtgcccagcggcagtcggattgcattgcggtacgaaccggggcggccaccgatt
ctggcggtgcgcattcaggaattgttcggcctgaccgagacaccgcgcatcgcccgcggt
cgggtgccggtgctgctgcatctgttggccccgaattatcgtccgcagcagattaccgat
gatctgtcgagtttctgggcgaatgtctatccgcaggttcgcaaagatttgcgggcacgc
tatcccaaacacgcctggccggaagacccttggaccgctaccgcacaatcccgtccgcag
cgccgcccctcctga
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