Thiomonas intermedia: Tint_2558
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Entry
Tint_2558 CDS
T01227
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
tin
Thiomonas intermedia
Brite
KEGG Orthology (KO) [BR:
tin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tin03019
]
Tint_2558
03009 Ribosome biogenesis [BR:
tin03009
]
Tint_2558
Messenger RNA biogenesis [BR:
tin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Tint_2558
Ribosome biogenesis [BR:
tin03009
]
Prokaryotic type
rRNA processing factors
Tint_2558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Exotox-A_cataly
Motif
Other DBs
NCBI-ProteinID:
ADG31899
UniProt:
D5X5K6
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All DBs
Position
2724397..2725902
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AA seq
501 aa
AA seq
DB search
MNPTPEDILINITPQETRVALVAHAAVQELHIERSLERGLVGNIYLGKVARVLPGMQSAF
IDIGLERTAFLHVADLWQRQAIPVSTEAASEAATAPPLQPIEKLIYEGQTLMVQVLKDPI
NTKGARLTTQISLAGRMLVHLPQDNHIGISQKIDGAELRTALRERMSALLAADAGDSQGF
IVRTNAEDASDAELAEDIAYLRKTWAAIQQRAHVTSPSALIYQELSLAQRVLRDLVSDAT
RSVQIDSRENFELLQGFAAEYMPRVSSRLQLYRGERPLFETANVDEEIERALGRRVDLKS
GGYLIIDQTEAMTTIDVNTGGFVGARNFDDTIYRTNLEATQAIARQLRLRNLGGIIIIDF
IDMHNAQHRAAVLDELRKSLARDKVKVTVSGFSQLGLVELTRKRTRDSLAHMLLEPCPTC
GGLGQVKTARTVCYEILREILREAKQFNPREFRIVGAADVIDLFLEEESQHLASLSDFIG
KPVSLQVEPAFSQQQYDIVLT
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgacgcccgaagacattctcatcaacatcaccccgcaggaaacccgggtcgcc
ttggtggcccacgccgcggtgcaggagctgcacatcgaacgcagcctggaacgcggtctg
gtgggcaatatctatctgggcaaagtggcgcgggtgctgcccggcatgcagtccgccttc
atcgacatcggcctggagcgcacggcctttttgcatgtggccgacctgtggcagcgccag
gccattcccgtgtccaccgaggccgccagcgaagccgcgacagcaccgccccttcagccc
atcgaaaagctgatctacgaaggccagacgttgatggtgcaagtgctcaaagacccgatc
aacaccaagggcgcgcgcctgaccacgcagatcagcctggccggacgcatgctggtgcat
ctgccgcaagacaaccacatcggcatttcgcaaaaaatcgacggcgcggagctgcgcacc
gcattgcgcgaacgcatgagcgccctgctggcggcggatgccggcgattcgcaaggcttc
atcgtgcgcaccaatgccgaagacgccagcgacgcggagctggccgaagacatcgcctac
ctgcgcaagacctgggccgccattcagcagcgcgcccacgtcaccagccccagcgccctg
atctaccaggaactcagcctggcgcagcgggtgctgcgggatctggtgagcgacgccacc
cgcagcgtgcagatcgactcgcgcgaaaacttcgagctgctgcagggcttcgccgccgaa
tacatgccccgcgtcagcagccgcctgcagctctaccgcggcgagcgcccgctgttcgag
accgccaacgtggacgaggaaatcgagcgcgcgctggggcggcgggtcgatctcaaatcc
ggcggctacctcatcatcgaccagaccgaggcgatgaccaccatcgacgtcaacaccggc
ggtttcgtcggcgcgcgcaacttcgacgacaccatctaccgcaccaatctggaggccacg
caagccatcgcccgccaactgcggctgcgcaatctgggcggcatcatcatcatcgacttc
atcgacatgcacaacgcccagcaccgcgccgccgtgctcgacgaactgcgtaaatcgctg
gcgcgcgacaaggtgaaagtcaccgtcagcggcttctcgcaactcggcctggtggaactc
acccgcaagcgcacccgagactcgctggcgcacatgctgctggagccctgccccacctgc
ggcgggctggggcaagtgaaaaccgcgcgcaccgtgtgctatgaaatcctgcgggaaatt
ctgcgcgaggccaaacaattcaacccgcgcgagttccgcatcgtcggcgccgccgacgtc
atcgacctgtttctcgaagaagaaagccagcacctggcctcgctctccgacttcatcggc
aagcccgtctcgctgcaggtcgagcccgctttttcgcagcaacagtacgacatcgtgctg
acctga
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