Thiomonas intermedia: Tint_3132
Help
Entry
Tint_3132 CDS
T01227
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tin
Thiomonas intermedia
Pathway
tin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Tint_3132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tin03400
]
Tint_3132
Enzymes [BR:
tin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tint_3132
DNA repair and recombination proteins [BR:
tin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Tint_3132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
DEAD
PriA_3primeBD
ResIII
Helicase_C
PriA_CRR
AAA_30
Bac_DnaA
HypA
zinc-ribbons_6
SWI2_SNF2
AAA_22
PhoH
DUF6087
AAA_19
ADDB_N
zf-IS66
Motif
Other DBs
NCBI-ProteinID:
ADG32459
UniProt:
D5X031
LinkDB
All DBs
Position
3319140..3321413
Genome browser
AA seq
757 aa
AA seq
DB search
MSVVLQVAVDAPGLPPLDYSAQAPLAPGTLVRVPLGRQTVSGVVMALVPQPEAARLAALR
PIAAAHTTLTPLAPAWLDLMQFVARYYQRALGEVIGAALPVQLRNRQPGEGTAAPPRSSN
TSYRCTAAGLSALPGQIAPRSVALWRLARALGVAEAGETPAASTLPCLSLIEARRLHPQA
VKVLADWEGSGWVEATAAAPVSPNPAASAAAPTLHPEQAQALEAIAASSGFSPFLLFGVT
GSGKTEVYLHAAAQVLQREPEAQVLVLTPEINLTPQLVGRFEQRFGAEHLAVLHSGLSEG
QRLRHWLAAHNGAARIVLGTRLAVLASLPTLRLIVVDEEHDPSYKQQEGARYSARDLALW
RAQQFGIAVVLGSATPSLESWRAAQTGRYQLLTLKQRATGVLPSVRIADTRRDPTLRASG
TLIGQTLDAALRQRLARGEQSLLFLNRRGYAPVLSCPDCGWMSDCPHCDAHLVFHRTDRT
LRCHHCGYQAAVPRACPGCGSLDLQPVGKGTQRVEEALAEKYPDARIARIDADSTRRKGA
AASRFDSVHAGEVDILVGTQMVTKGHDFQKVTLVAALNPDAGLFTHDPRGPERLFAQLMQ
AAGRAGRALPPQGDTPASTPEMLVQTAHPEHPLYRALVAHDYPGFAQAELIERERGGMPP
FSYQALLRAEHRNIDAVVEFLAQAQQLAAPLAEALGVTVYPPIPATLARMADVHRLQMLI
EGSHRGALQNLLSHWRAELSALRSRVRWAVDVDPLDF
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcgttctccaggttgccgtcgacgcgccgggcctgccgccactcgattacagc
gctcaggcgccgctggcgccgggcacgctggtacgcgttcctctgggacgccagaccgtc
agcggggtggtgatggcgctggtaccgcagccagaagcagcccgtctcgccgcgctgcgc
cccattgccgcagcgcacaccaccctcaccccgctggcccccgcctggctggacttgatg
cagttcgtcgcgcggtactaccagcgcgcgctgggagaagtcatcggggcggccttgccc
gtccagttgcgcaaccgccaacccggcgagggaacggccgcgccgcctcgatcttcaaac
acgagctatcgctgcaccgcagcgggcctgtcggccttgcccgggcagattgcgccgcgc
agcgtggcgctctggcggctggcgcgcgcactcggcgtcgctgaagcgggggaaactcct
gctgcctcgacgctgccgtgcctcagcctgatcgaggcgcggcgcttgcatccgcaagcc
gtcaaggtgctggccgactgggagggctcgggctgggtggaagccaccgcagccgccccc
gtctcgccgaacccggccgcatcggccgctgcgcctacgctgcacccagagcaggcgcag
gcgctcgaagccatcgccgccagttcgggcttttcgcccttccttttgtttggcgtgacc
ggcagtggcaagaccgaggtttatctgcacgctgcggcgcaggtgttgcagcgcgagccc
gaagcgcaggtgttggtgctgacgcccgaaatcaatctcacgccgcaactggtgggccgt
ttcgagcaacgcttcggcgcagagcacctcgccgttttgcacagcggcctgtcggaaggg
cagcggctgcgacactggctggcggcccacaacggcgcagcgcgcatcgtgctcggaacc
cggctggcggtgctggcttcactgccgacgttgcggctcatcgtggtcgacgaagagcac
gacccgtcctacaaacagcaggaaggcgcgcgctattccgcccgcgacctggcgctatgg
cgagcgcagcaattcggcattgccgtcgtgctcggctcggccaccccctcgctggaaagc
tggcgggccgcgcagaccgggcgctaccagttgctcaccttgaaacagcgcgccaccggg
gtgctgcccagcgtgcgcatcgccgacacccggcgcgacccgacgctgcgcgccagcggc
acgctgatcggccagacgctcgacgccgcactgcgtcagcggctcgcgcgcggcgagcaa
agcctgctgtttctcaaccgccgcggctatgccccggtgttgagctgccccgactgcggc
tggatgtcggactgcccgcactgcgacgcgcatctggtgtttcaccgcaccgaccgcacc
ctgcgctgccaccactgcggctaccaggccgccgtgccgcgcgcctgtccgggctgcggc
agcctcgatctgcagcccgtgggcaagggcacgcaacgggtggaagaggcgctggccgaa
aagtatcccgatgcccgtatcgcccgcatcgacgccgacagcacgcgccgcaaaggcgcg
gcggcaagccgtttcgacagcgtccacgccggtgaagtggacattctggtgggcacgcaa
atggtgaccaagggccacgacttccagaaagtcaccctggtcgccgcgctcaaccccgat
gccgggctgttcacccacgatccgcgcgggcccgagcgtctgttcgcccaactcatgcag
gcggccgggcgggcgggccgcgccttgccgccccagggcgatacccccgcctccaccccc
gaaatgctggtgcagaccgcccaccccgaacatccgctgtaccgcgcgctggtggcacac
gactatcccggttttgcgcaggccgaactcatcgagcgcgagcgcggcggcatgccgccg
ttttcctatcaggccctgctgcgcgcggaacaccggaatatcgacgctgtggtcgagttt
ctggcacaggcgcagcaactcgccgcgcccttggccgaggcgctgggcgtgaccgtctat
ccccccattcccgccacgctcgcccgcatggccgatgtgcaccgcctgcagatgctgatc
gaaggcagccatcgcggcgcgttgcagaatctgctttcgcactggcgcgccgagctctcc
gccctgcgctctcgggtgcgctgggcggtcgatgtcgacccgctcgatttctga
DBGET
integrated database retrieval system
