Thermoanaerobacter italicus: Thit_0465
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Entry
Thit_0465 CDS
T01178
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
tit
Thermoanaerobacter italicus
Pathway
tit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Thit_0465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tit03400
]
Thit_0465
Enzymes [BR:
tit01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Thit_0465
DNA repair and recombination proteins [BR:
tit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Thit_0465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
Viral_helicase1
HHH_5
AAA_11
PIF1
SLFN-g3_helicase
DEAD
Helicase_RecD
PhoH
nSTAND3
MeaB
AAA_22
AAA_24
SRP54
DNA_pol_lambd_f
Ribosomal_S13
T2SSE
ABC_tran
AAA_28
KAP_NTPase
UvrD-helicase
AAA_16
HHH
NTPase_1
ATPase_2
RsgA_GTPase
AAA_12
AAA
UvrD_C
cobW
TrwB_AAD_bind
AAA_29
MobB
HHH_2
CbiA
AAA_23
KTI12
Zeta_toxin
HerA_C
TsaE
Motif
Other DBs
NCBI-ProteinID:
ADD01772
UniProt:
D3T740
LinkDB
All DBs
Position
512108..514315
Genome browser
AA seq
735 aa
AA seq
DB search
MVDIEGVVEEIIFRNEQNGYTVLELSTRGLAVTAVGYMPFVNIGERIKIEGEWIEHPDYG
EQIKVLNYQTLAPTTLEGIEKFLSSGLIPGIGPVTARKIVKKFGVDSLNIIETAPERLKE
IKGLSDEKIKRICEAYEMQKGIKEVMVFLQGYGISTAMAIKIYKEYGNNAIEIIKQNPYR
LADDIFGIGFKTADKIAESLGVDPHSLYRISSGTRYVLMQYASNGHTYVPKELLKKETAN
LLEVSEEEVEDSFVLLIQSKKVHIETFEDGTVGVYYVPYYMAELHTAERLFEMTLIENEN
FDIDIKKEIINFEKETGILLAENQKLAVEEAVKNSVVVITGGPGTGKTTIINCIIRIFEK
AGKKVALAAPTGRAAKRITEATGKEAKTIHRLLEYTYSEEDGKGFNKNEKDPLKYDVIIV
DEASMVDILLMNALLKAIPIGAKLILVGDADQLPSVGAGNVLRDIIDSGIVKVIRLKEIF
RQQKQSLIVVNAHKINNGEYPTYNDKNSDFFFINANTQEDILKTILELVTNRLPKAYGFH
PINDIQVLTPMRKGIIGVHNLNLELQKALNPHDKTKAEKIMKEFVFRVGDKVMQIKNNYK
IKWKKGDEEGEGVFNGDIGIIQSIDEELQELTVYFDDEKFVTYDFSDLDELNLSYAITVH
KSQGSEFPVVIIPITYGPPMLLTRNLLYTAVTRARKLVILVGQEKYLKFMIDNNRISKRY
SGLLSRLKKTLLYVN
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggttgacatagagggcgtagttgaagaaataatttttagaaatgaacaaaatggttat
acggttttagaattaagtacccgaggtttagcagttactgctgtaggctatatgcctttt
gtaaacattggagagagaattaaaattgaaggtgaatggatagaacatcctgattacggt
gagcaaattaaggttttaaattatcaaaccttggctcctaccactttggaaggaatagaa
aagtttttatcttctggcttaattcctggaatagggcctgttacagcaagaaaaattgta
aaaaaatttggcgttgattctttaaatataattgaaactgcaccagaaagattaaaagaa
ataaaaggcctaagcgatgagaaaataaaaagaatttgtgaagcatatgaaatgcaaaag
ggcataaaagaagttatggtgtttttacagggatacggcatttctactgcaatggctata
aagatttataaagagtacggaaacaacgcgattgaaattattaaacaaaacccttacaga
ttagctgatgatatatttggaataggttttaaaacagcagacaaaatagcagagagttta
ggagttgaccctcattctttatatcgcatatcttctggtactcggtatgttttgatgcaa
tatgcgtcaaatggtcacacttatgttccaaaggaattgttaaaaaaagaaacagcgaat
ttattagaagtaagtgaagaagaggtagaggattcttttgtacttttaattcaaagcaaa
aaagtgcatattgagactttcgaagatggtactgtaggggtctactatgtaccttattat
atggctgaactacacacagcagagagattgtttgaaatgacattaatagagaatgaaaat
ttcgacatagatatcaaaaaagaaattataaatttcgaaaaagaaacgggtatcttgcta
gcagaaaatcaaaaattggctgtagaagaagctgttaaaaattctgttgttgtcataacg
ggaggtccaggcacaggaaaaactacaataataaattgtataatacgtatttttgaaaaa
gctggtaaaaaagtggctcttgcagcccctacaggaagagccgcaaaaaggataactgaa
gcaactgggaaagaggcaaaaaccattcataggcttttagaatatacttattcggaagaa
gatgggaagggctttaacaaaaatgaaaaagacccattaaaatacgatgttataatagtt
gacgaagcttcaatggtagatatattgcttatgaatgctttattaaaagccatacctata
ggggcaaaactgattttagtaggggatgctgatcagcttccatctgtcggtgccggaaat
gtcctaagagatataatagacagtggaatagtaaaagtgatacgtttaaaagaaattttt
agacagcaaaagcaaagtttgatagtagtaaatgctcacaagataaataatggagaatat
ccaacctataacgataaaaatagtgatttcttttttataaatgctaacacccaagaggat
atattaaaaaccatattggagcttgtgacaaacagacttcctaaagcttatggatttcat
cctattaatgatattcaagtacttacccctatgagaaaagggataattggtgttcacaat
ttaaatttagagctgcaaaaagcattaaatccccacgacaaaactaaagccgaaaaaata
atgaaggagtttgtcttcagggtgggggataaagtgatgcaaataaaaaataactacaag
ataaaatggaaaaaaggcgatgaagaaggggaaggagtgtttaacggagatataggaata
attcaatcaatagacgaagaattacaggaattgactgtgtattttgacgacgaaaaattt
gtcacttatgacttttctgatttggacgaactaaatttgtcttatgccataacagtccac
aaaagccaaggcagtgaatttcctgttgtcataataccaattacttatggcccccctatg
ctacttacaagaaatcttttgtatactgctgttacaagggcaaggaaattggttattttg
gtagggcaagagaaatatttgaaatttatgattgataacaatagaatttcaaaaagatat
tcagggcttctttcaagacttaaaaaaacgcttttgtatgtaaactag
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