Thermincola potens: TherJR_2331
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Entry
TherJR_2331 CDS
T01226
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tjr
Thermincola potens
Pathway
tjr03030
DNA replication
tjr03430
Mismatch repair
tjr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tjr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TherJR_2331
03430 Mismatch repair
TherJR_2331
03440 Homologous recombination
TherJR_2331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tjr03032
]
TherJR_2331
03400 DNA repair and recombination proteins [BR:
tjr03400
]
TherJR_2331
Enzymes [BR:
tjr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TherJR_2331
DNA replication proteins [BR:
tjr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TherJR_2331
DNA repair and recombination proteins [BR:
tjr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TherJR_2331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
DUF6282
Motif
Other DBs
NCBI-ProteinID:
ADG83172
UniProt:
D5XA39
LinkDB
All DBs
Position
complement(2405112..2408552)
Genome browser
AA seq
1146 aa
AA seq
DB search
MAADFIHLHVHTEYSLLDGAARIRDLVSAAAEKGMKALAVTDHGSMFGVIDFYKACKKAG
IKPILGCEVYVAPRSMDDREPGRDDANYHLVLLAENETGYKNLLHIVSEAYTRGFYYKPR
TDKAALRKHSEGLIALSACLGGEIATAIVNGQSDKARAAAREYEDIFGKGNFFLELQDHG
LENQRMVNMELVKIGRELNIPLVVTNDVHYVRKSDAEVQDVLLCIGTGRTMEDADRMEFG
TSEFYLKDAREMALLAGEYPEALANTVNIAARCNVEFDFSQNYLPDYMIPEGHTVESYLR
QLCLDGLKKRYPNAGEEVRRRLEYELQVINDMGFPGYFLIVWDFVRFAREKGILVGPGRG
SAAGSLVAYTLGITNIDPLKYDLLFERFLNPERVTMPDIDIDFCYEKREEVIRYVIERYG
ADRVAQIITFGTMAARAAIRDVGRALNMPYAEVDRVAKMIPGELGMTLDKALEASPELRE
LYETEPKVHKLVDMARAIEGMPRHASTHAAGVVIGREPLTRYLPLYRSSDGVVTTQFAKE
TVEEIGLLKMDLLGLRTLTVIGDAVNIIKHTTGDEIDIDNIPLDDRATYEMLGRGDAIGV
FQLESSGMRAILKELKPEVLDDIIALVALYRPGPLGSGMVEDFIRRKHGQSEIKYLHPAL
EPILKDTYGVILYQEQVMRIASDLAGFTLGEADLLRRAMGKKKPEVIAGLRNQFIEGARK
NNIEETIAGQIFDLMEYFAGYGFNKSHSAAYALVSYQTAYLKANYPVAYMAALLTSVAGS
SDKVAVYIEECKRMGIDILPPDINESLVNFTVVGDKIRFGLAAVKNVGRQAIEHIIAVRS
KKKFASLLDFCERAEHRVVTKRVIESLIKGGAFDSLTGNRRQLLEGLDRCLEWAAKRQKD
LSTGQISLFDVYEGDSSFGGEVPLPPVPDFPQHELLAMEKEMLGLYISGHPLEQYRRELA
EKTTATTAQLVEMQDQEEVVIGGIIAGMRKITTRRGETMLLMNLEDLVGSVEVIVFPKVY
QQFRAMIYPDAILFIRGRINQGDEEVKIIAEQIMNPATGLLSEIYLKIPSAGDAALMDRL
KGVMRRYRGSHPVMLYFTDTRKMIKTKTEWWLNPLPEALAELTDLLGEGSVLVKEKEDSG
GSALPV
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgattttatccacctccatgttcatacagaatactctctcttagacggtgca
gcccgcatcagggacctggtgtccgctgccgccgaaaaggggatgaaggccctggctgtt
accgaccatgggtctatgttcggggttattgatttttacaaagcctgcaagaaggccggg
atcaagcctattctgggctgtgaagtttacgtggcacctcgttccatggacgaccgggag
ccgggacgggatgacgccaactaccacctggttcttttggcggaaaacgaaacagggtat
aagaatctcctgcacatcgtttctgaagcctatacccgcggcttctactataaaccgcgt
accgataaggcggccctgcgcaagcacagtgaagggttgattgccttaagcgcttgcctt
ggcggtgaaattgccacggctattgtaaacggccagtctgacaaggcccgggccgcggcc
agggaatatgaagatatatttggcaaagggaactttttcctggaactacaggaccatggc
ctagaaaatcagcgcatggtcaatatggaactggtcaaaatcggccgggaactgaatatt
cccctggttgtcactaatgacgtccattacgtgcggaaaagcgatgccgaggtgcaggat
gtcttactctgcattggtacagggcggaccatggaagatgcagaccgcatggaattcggc
acttcggaattctacctgaaggatgcccgggaaatggccctgctggcgggagaataccct
gaggctttggccaatactgtcaatatagcggcacggtgtaatgtggagtttgattttagc
caaaactatcttccggattacatgattcccgaagggcatacggttgagtcttatttgcgc
cagctatgcctggatggcttgaaaaagcgctatcccaacgccggggaagaagtccgcagg
cggctggaatatgagctacaggtcattaacgacatgggtttccccggttacttcttaatc
gtttgggattttgtgcgttttgcgcgggaaaaagggattctggtgggaccggggcggggg
agcgccgccgggagtttggtggcttatactctggggataaccaacatcgaccccttaaaa
tacgaccttctttttgagcggttcctgaaccctgaacgggtaactatgccggatattgat
atcgatttttgttatgagaagcgggaagaagttatccgttacgttatagaacgttatggg
gccgacagggtagcccagatcatcacttttggaaccatggcagcgcgggcggccattagg
gatgtgggcagggccttgaatatgccctatgcagaggtagaccgggtagctaagatgatt
cccggggaactgggcatgaccctggacaaggctctggaagcaagccccgaattgcgggag
ctttatgaaacagaaccaaaggtacacaagctggtagatatggcccgggctatcgaaggc
atgccgcgacatgcctccacccatgcggcgggggtggtcatcgggagagaacccctgacc
cgttacctgcccttgtataggtcttctgatggggtggtgaccacccagtttgccaaggag
actgtcgaggaaatcggcctgctgaaaatggacttgctgggcttgcgtaccttgacggta
attggggatgcagtgaatatcattaagcataccactggtgatgaaattgatatagacaat
attccccttgacgaccgggccacatatgaaatgctgggccggggagatgccatcggggtt
ttccagttggaaagttcgggcatgcgggctatcttgaaggaactaaagcccgaagttctg
gatgatattatcgccctcgttgccttgtaccgcccgggcccgttaggcagcggcatggtg
gaagatttcatccgccgcaagcacggacagagtgaaatcaagtacctgcacccggcgttg
gagccaattttaaaggatacctacggcgttatcctttaccaggaacaggtcatgcggatt
gctagcgacttggccggttttaccctgggcgaagcagatctgttgcggcgggccatgggt
aagaaaaagccggaggtaattgccgggctccggaaccagtttattgagggggcccggaaa
aacaacattgaagaaactattgccgggcagatttttgacctgatggaatactttgccggc
tacgggtttaacaaaagccactcggcggcttacgccctggtgtcttaccagacggcttac
ctgaaggccaattatcccgtggcttacatggcggccctgctgaccagcgtggccggcagc
agcgacaaagtggctgtctatatcgaggaatgcaaacgtatgggtatagatatactccct
ccggatatcaatgaatcccttgtaaatttcactgtggtaggagataaaatcaggtttggg
ttggcggcggtaaagaatgtggggcgccaggccattgagcatattatagctgtgcgcagc
aaaaagaagtttgcctccctgctggatttctgtgagcgggccgagcaccgggtagttacc
aagcgggtgattgaaagcctgatcaaaggaggcgcttttgattctctgacgggcaaccgc
cggcagttgctggagggtttggacagatgcctggaatgggcggccaaaaggcaaaaagac
ctttccaccggccagatatctttatttgatgtatatgaaggcgacagcagttttggcgga
gaggttccgctgcctccggtaccggattttccgcagcatgaattactggccatggaaaag
gaaatgctcgggttgtatataagcggccacccactggaacagtatcgccgggaactggcg
gaaaaaacgacggccactaccgcccaattagtggagatgcaggaccaggaggaagttgtt
attggcggtattattgccggtatgcggaaaattaccaccagacggggagaaaccatgcta
ttgatgaacctggaggacttggtaggcagtgtggaagtgattgtctttccaaaggtctat
cagcagttccgggccatgatatatcctgatgccattctttttattcgcggtcgtattaac
cagggagatgaggaagtaaagattattgccgagcaaataatgaatccggctaccggactt
ttatcggaaatatacctgaaaattccgtctgccggcgatgcggccctcatggaccggttg
aagggtgtcatgcgccgttaccggggcagccaccctgttatgctatattttaccgatacc
cggaaaatgattaaaaccaagaccgaatggtggctgaaccccctgccggaagcattggcc
gaacttacagacctgctgggcgagggatcggtattggtgaaagaaaaagaagatagcggc
ggcagcgccctgcctgtttag
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