KEGG   Thermincola potens: TherJR_2331
Entry
TherJR_2331       CDS       T01226                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
tjr  Thermincola potens
Pathway
tjr03030  DNA replication
tjr03430  Mismatch repair
tjr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tjr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TherJR_2331
   03430 Mismatch repair
    TherJR_2331
   03440 Homologous recombination
    TherJR_2331
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tjr03032]
    TherJR_2331
   03400 DNA repair and recombination proteins [BR:tjr03400]
    TherJR_2331
Enzymes [BR:tjr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     TherJR_2331
DNA replication proteins [BR:tjr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     TherJR_2331
DNA repair and recombination proteins [BR:tjr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     TherJR_2331
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DUF655 DUF6282
Other DBs
NCBI-ProteinID: ADG83172
UniProt: D5XA39
LinkDB
Position
complement(2405112..2408552)
AA seq 1146 aa
MAADFIHLHVHTEYSLLDGAARIRDLVSAAAEKGMKALAVTDHGSMFGVIDFYKACKKAG
IKPILGCEVYVAPRSMDDREPGRDDANYHLVLLAENETGYKNLLHIVSEAYTRGFYYKPR
TDKAALRKHSEGLIALSACLGGEIATAIVNGQSDKARAAAREYEDIFGKGNFFLELQDHG
LENQRMVNMELVKIGRELNIPLVVTNDVHYVRKSDAEVQDVLLCIGTGRTMEDADRMEFG
TSEFYLKDAREMALLAGEYPEALANTVNIAARCNVEFDFSQNYLPDYMIPEGHTVESYLR
QLCLDGLKKRYPNAGEEVRRRLEYELQVINDMGFPGYFLIVWDFVRFAREKGILVGPGRG
SAAGSLVAYTLGITNIDPLKYDLLFERFLNPERVTMPDIDIDFCYEKREEVIRYVIERYG
ADRVAQIITFGTMAARAAIRDVGRALNMPYAEVDRVAKMIPGELGMTLDKALEASPELRE
LYETEPKVHKLVDMARAIEGMPRHASTHAAGVVIGREPLTRYLPLYRSSDGVVTTQFAKE
TVEEIGLLKMDLLGLRTLTVIGDAVNIIKHTTGDEIDIDNIPLDDRATYEMLGRGDAIGV
FQLESSGMRAILKELKPEVLDDIIALVALYRPGPLGSGMVEDFIRRKHGQSEIKYLHPAL
EPILKDTYGVILYQEQVMRIASDLAGFTLGEADLLRRAMGKKKPEVIAGLRNQFIEGARK
NNIEETIAGQIFDLMEYFAGYGFNKSHSAAYALVSYQTAYLKANYPVAYMAALLTSVAGS
SDKVAVYIEECKRMGIDILPPDINESLVNFTVVGDKIRFGLAAVKNVGRQAIEHIIAVRS
KKKFASLLDFCERAEHRVVTKRVIESLIKGGAFDSLTGNRRQLLEGLDRCLEWAAKRQKD
LSTGQISLFDVYEGDSSFGGEVPLPPVPDFPQHELLAMEKEMLGLYISGHPLEQYRRELA
EKTTATTAQLVEMQDQEEVVIGGIIAGMRKITTRRGETMLLMNLEDLVGSVEVIVFPKVY
QQFRAMIYPDAILFIRGRINQGDEEVKIIAEQIMNPATGLLSEIYLKIPSAGDAALMDRL
KGVMRRYRGSHPVMLYFTDTRKMIKTKTEWWLNPLPEALAELTDLLGEGSVLVKEKEDSG
GSALPV
NT seq 3441 nt   +upstreamnt  +downstreamnt
atggctgctgattttatccacctccatgttcatacagaatactctctcttagacggtgca
gcccgcatcagggacctggtgtccgctgccgccgaaaaggggatgaaggccctggctgtt
accgaccatgggtctatgttcggggttattgatttttacaaagcctgcaagaaggccggg
atcaagcctattctgggctgtgaagtttacgtggcacctcgttccatggacgaccgggag
ccgggacgggatgacgccaactaccacctggttcttttggcggaaaacgaaacagggtat
aagaatctcctgcacatcgtttctgaagcctatacccgcggcttctactataaaccgcgt
accgataaggcggccctgcgcaagcacagtgaagggttgattgccttaagcgcttgcctt
ggcggtgaaattgccacggctattgtaaacggccagtctgacaaggcccgggccgcggcc
agggaatatgaagatatatttggcaaagggaactttttcctggaactacaggaccatggc
ctagaaaatcagcgcatggtcaatatggaactggtcaaaatcggccgggaactgaatatt
cccctggttgtcactaatgacgtccattacgtgcggaaaagcgatgccgaggtgcaggat
gtcttactctgcattggtacagggcggaccatggaagatgcagaccgcatggaattcggc
acttcggaattctacctgaaggatgcccgggaaatggccctgctggcgggagaataccct
gaggctttggccaatactgtcaatatagcggcacggtgtaatgtggagtttgattttagc
caaaactatcttccggattacatgattcccgaagggcatacggttgagtcttatttgcgc
cagctatgcctggatggcttgaaaaagcgctatcccaacgccggggaagaagtccgcagg
cggctggaatatgagctacaggtcattaacgacatgggtttccccggttacttcttaatc
gtttgggattttgtgcgttttgcgcgggaaaaagggattctggtgggaccggggcggggg
agcgccgccgggagtttggtggcttatactctggggataaccaacatcgaccccttaaaa
tacgaccttctttttgagcggttcctgaaccctgaacgggtaactatgccggatattgat
atcgatttttgttatgagaagcgggaagaagttatccgttacgttatagaacgttatggg
gccgacagggtagcccagatcatcacttttggaaccatggcagcgcgggcggccattagg
gatgtgggcagggccttgaatatgccctatgcagaggtagaccgggtagctaagatgatt
cccggggaactgggcatgaccctggacaaggctctggaagcaagccccgaattgcgggag
ctttatgaaacagaaccaaaggtacacaagctggtagatatggcccgggctatcgaaggc
atgccgcgacatgcctccacccatgcggcgggggtggtcatcgggagagaacccctgacc
cgttacctgcccttgtataggtcttctgatggggtggtgaccacccagtttgccaaggag
actgtcgaggaaatcggcctgctgaaaatggacttgctgggcttgcgtaccttgacggta
attggggatgcagtgaatatcattaagcataccactggtgatgaaattgatatagacaat
attccccttgacgaccgggccacatatgaaatgctgggccggggagatgccatcggggtt
ttccagttggaaagttcgggcatgcgggctatcttgaaggaactaaagcccgaagttctg
gatgatattatcgccctcgttgccttgtaccgcccgggcccgttaggcagcggcatggtg
gaagatttcatccgccgcaagcacggacagagtgaaatcaagtacctgcacccggcgttg
gagccaattttaaaggatacctacggcgttatcctttaccaggaacaggtcatgcggatt
gctagcgacttggccggttttaccctgggcgaagcagatctgttgcggcgggccatgggt
aagaaaaagccggaggtaattgccgggctccggaaccagtttattgagggggcccggaaa
aacaacattgaagaaactattgccgggcagatttttgacctgatggaatactttgccggc
tacgggtttaacaaaagccactcggcggcttacgccctggtgtcttaccagacggcttac
ctgaaggccaattatcccgtggcttacatggcggccctgctgaccagcgtggccggcagc
agcgacaaagtggctgtctatatcgaggaatgcaaacgtatgggtatagatatactccct
ccggatatcaatgaatcccttgtaaatttcactgtggtaggagataaaatcaggtttggg
ttggcggcggtaaagaatgtggggcgccaggccattgagcatattatagctgtgcgcagc
aaaaagaagtttgcctccctgctggatttctgtgagcgggccgagcaccgggtagttacc
aagcgggtgattgaaagcctgatcaaaggaggcgcttttgattctctgacgggcaaccgc
cggcagttgctggagggtttggacagatgcctggaatgggcggccaaaaggcaaaaagac
ctttccaccggccagatatctttatttgatgtatatgaaggcgacagcagttttggcgga
gaggttccgctgcctccggtaccggattttccgcagcatgaattactggccatggaaaag
gaaatgctcgggttgtatataagcggccacccactggaacagtatcgccgggaactggcg
gaaaaaacgacggccactaccgcccaattagtggagatgcaggaccaggaggaagttgtt
attggcggtattattgccggtatgcggaaaattaccaccagacggggagaaaccatgcta
ttgatgaacctggaggacttggtaggcagtgtggaagtgattgtctttccaaaggtctat
cagcagttccgggccatgatatatcctgatgccattctttttattcgcggtcgtattaac
cagggagatgaggaagtaaagattattgccgagcaaataatgaatccggctaccggactt
ttatcggaaatatacctgaaaattccgtctgccggcgatgcggccctcatggaccggttg
aagggtgtcatgcgccgttaccggggcagccaccctgttatgctatattttaccgatacc
cggaaaatgattaaaaccaagaccgaatggtggctgaaccccctgccggaagcattggcc
gaacttacagacctgctgggcgagggatcggtattggtgaaagaaaaagaagatagcggc
ggcagcgccctgcctgtttag

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