Thermovirga lienii: Tlie_1098
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Entry
Tlie_1098 CDS
T01644
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
tli
Thermovirga lienii
Brite
KEGG Orthology (KO) [BR:
tli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tli03019
]
Tlie_1098
03009 Ribosome biogenesis [BR:
tli03009
]
Tlie_1098
03036 Chromosome and associated proteins [BR:
tli03036
]
Tlie_1098
Enzymes [BR:
tli01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Tlie_1098
Messenger RNA biogenesis [BR:
tli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Tlie_1098
Ribosome biogenesis [BR:
tli03009
]
Eukaryotic type
90S particles
RNase
Tlie_1098
Prokaryotic type
rRNA processing factors
Tlie_1098
Chromosome and associated proteins [BR:
tli03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Tlie_1098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Ribosomal_S5
Motif
Other DBs
NCBI-ProteinID:
AER66831
UniProt:
G7VAD1
LinkDB
All DBs
Position
complement(1160569..1161252)
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AA seq
227 aa
AA seq
DB search
MRSDDLKKIESFFGYPLKDRALFEEALCHMSYTNEKGLDVSNERLEFLGDAVIGLVVSSF
LYETFPSDDEGQMSHKKAALVCEKALAEWALEIGLDKFLCIGKGLEKEGGRNNYSVLSDA
MEALIGAYFLDGGYETAHKIVRQYCEKKKTELEQRIYDANLELKKVLLDKGEMIYELVKT
EGPPHRPLHWVRILLNGEVIGQGQGRSIKEAKRKAAEDALKNMQPLA
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgagaagcgatgatcttaaaaaaatagagtcgttttttggatatccactcaaagatagg
gcccttttcgaagaggccctatgtcatatgtcctacactaacgaaaagggccttgatgta
tctaatgagcggctggaatttttgggagatgccgttatcggattggtggtgtcctctttt
ctatatgaaacttttccctccgacgatgagggacagatgtctcacaagaaagcggcccta
gtttgcgagaaagctttggctgaatgggccttggaaattggattagataagttcttgtgt
ataggtaagggattggagaaagagggagggcggaacaattattcggtcctttcggatgcc
atggaggccttaattggcgcatattttctagatggtggatacgagacagctcacaaaatc
gttaggcaatactgcgaaaagaaaaaaacagagttggagcaaagaatatatgatgccaac
ttagagttaaagaaggtcctcttggataaaggtgaaatgatctacgaacttgtaaagacg
gaggggccacctcatagacctctgcactgggtaaggatattactgaacggagaagtaatt
gggcaagggcagggcagaagcataaaggaagccaaaaggaaggcggcagaagatgcctta
aagaatatgcaaccgcttgcataa
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integrated database retrieval system
