KEGG   Thioflavicoccus mobilis: Thimo_3409
Entry
Thimo_3409        CDS       T02397                                 
Name
(GenBank) Type III restriction enzyme, res subunit
  KO
K01156  type III restriction enzyme [EC:3.1.21.5]
Organism
tmb  Thioflavicoccus mobilis
Brite
KEGG Orthology (KO) [BR:tmb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tmb02048]
    Thimo_3409
Enzymes [BR:tmb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.5  type III site-specific deoxyribonuclease
     Thimo_3409
Prokaryotic defense system [BR:tmb02048]
 Restriction and modification system (R-M system)
  Type III R-M system
   Thimo_3409
SSDB
Motif
Pfam: ResIII RE_endonuc Tn7_TnsA-like_N TetR_C_30 Se-cys_synth_N Helicase_C
Other DBs
NCBI-ProteinID: AGA92077
UniProt: L0H211
LinkDB
Position
3731780..3734869
AA seq 1029 aa
MDNPFFDRPILNSPYAYPARHWELDEQGQPTQKVIEARRRAEFITPIPKPKKRKGAGQQA
DLLFNEGLDLSTDGQRYDHTAIVNAVRTEVDKWRQFPAHLSRVTPETARLLEHWRHHRFA
GIRPFFCQVEAVETAIWLTEVAPQIGKSGRRFVDHLERANRDANPELFRLALKLATGAGK
TTVMAMLIAWQTLNAVRRPGSQKFTRGFLIVAPGLTIKDRLRVLQPNDPDSYYASRELVP
GDMLTDLERAKIVITNYHAFKRRERMELSKGNRRLLQGRTGTALNTVETEGQMLQRVMPE
LMGMKGILAINDEAHHCYREKPSDPEEAKLKGDDRKEAEQNNEAARLWISGLEAVNRHLV
LTRVIDLSATPFFLRGSGYVEGTLFPWTLSDFSLMDAIECGIVKLPRVPISDNIPGGEMP
MFRNLWEHIRAKMPKKGRGKAASLNPLDLPPQLQTALDALYGHYQQTFDLWSKAGISVPP
CFIVVCNNTSTSKLVYDFISGFVQKNDDGSGTPVPGRLELFRNQDEHGNPLPRPRTLLID
SEQLESGEGLDTRFRDIAGPEIERFRREIFERGGRLADELRAGKTLDDAALLREVMNTVG
KPGRLGDSIRCVVSVSMLTEGWDANTVTHVLGVRAFGTQLLCEQVIGRALRRQSYDLNED
GLFNVEYADVLGIPFDFTANPVIVKPQPPRETIQVKAMRPERDHLEIRFPRVQGYRAEPP
EDRLTADFNDDSVMTLTPELVGATETRNAGIIGAPIDLNLVHTGDVRPSQVLYELTSHLL
LTRWRDGDDQPQMHLFGQLKRLTQQWLKTCLVCKGGTYPAQLKYKTLADMASERITAAIT
RSLVGKRPIKAVLDPYNPTSSTLHVNFTTSKTERWETAADRCHLNWVILDSDWEAEFCRI
AEQHERVIAYVKNHNLGLTVPYRYGSETRTYLPDFIVLVDDGHGPEDPLHLVVEIKGYRR
EDAKEKKSTMDTYWVPGVNNLGTFGRWAFAEFTDVFQMQADFAEKVAEAFEAMIANFVEV
PLASTTASG
NT seq 3090 nt   +upstreamnt  +downstreamnt
atggacaaccccttcttcgatcggccgatcctgaattctccttacgcgtacccggcgcgg
cactgggagctggacgagcagggccagccgacccaaaaggtcatcgaggctcgacgtcgc
gccgagttcatcaccccgatccccaagcccaagaagcggaagggcgctggacagcaagcc
gacctcctgttcaacgaaggtctcgacctcagcaccgacggccagcggtacgaccacacg
gccatcgtcaacgccgtgcggacggaggtcgacaagtggcgccagttccccgcgcatctc
tcgcgcgtgactcccgagaccgcccgtctcctcgagcactggcggcatcatcgcttcgcc
ggcatccgtcccttcttctgccaggtcgaggcggtcgagaccgcgatctggctgaccgag
gtcgccccgcagatcggcaaatccggtcggcgcttcgtcgatcacctggagcgcgccaac
cgcgacgccaaccccgagctgttccggctcgccctgaagctcgcgactggcgccggcaag
acgactgtcatggctatgctgatcgcctggcagacgctcaacgcggtgcgacggccgggc
agtcaaaagttcacccgcggctttctcatcgtcgcgcctggtttgaccatcaaggatcgg
ttgcgcgttctgcagcccaacgaccccgacagctactacgcgagccgcgagctggttccc
ggcgacatgctcacggatcttgagcgcgccaagatcgtcatcaccaactaccacgccttc
aagcgccgcgagcgcatggagctgtccaagggcaatcgccgcctgctccagggtcgcacc
ggcaccgcgctcaataccgtcgagaccgagggccagatgctccagcgcgtcatgccggag
ctgatggggatgaagggcatcctcgccatcaacgacgaggcgcaccactgttaccgcgaa
aagccctcggatccggaggaggccaagctcaagggtgacgaccgcaaagaagccgaacaa
aacaacgaggccgcgcgcctctggatctcggggctcgaggccgtcaaccgccacctggtg
ctgacccgagtcatcgacctctcggccacgccctttttcctgcgcggctcgggctatgtc
gaggggaccctcttcccctggaccctaagcgacttctcgctgatggacgccatcgagtgc
ggcatcgtcaagctcccgcgcgtgcccatctcggacaacatccccggcggcgagatgccc
atgttccgcaacctctgggagcacatccgcgccaagatgcccaaaaagggccgcggcaag
gcggccagcctgaacccgctcgacctgccgccgcagctacagaccgcgctcgatgccctg
tatggccactaccagcagacgttcgacctctggtccaaggccgggatctccgtgccgccc
tgcttcatcgtcgtctgcaacaacacctcgacctccaagctcgtctatgacttcatctcc
gggttcgttcagaagaacgacgacggcagcggcacccccgtccccggccgcctggagctg
ttccgcaatcaagacgagcacggcaatccgctgccgcgtccccgcaccctcctgatcgac
agcgagcagctcgaatccggagagggtctcgacaccaggttccgcgacatcgccggcccc
gagatcgagcggttccgccgcgagatcttcgagcgcggcgggcgcctggccgacgagctg
cgcgccggcaagaccctggacgacgcggccctgctgcgcgaggtcatgaacaccgtcggc
aagcccggccggctcggcgattccatccgctgtgtggtctcggtctcgatgctcaccgag
ggctgggacgccaacacggtcacccatgtgctgggcgtgcgcgccttcggcacccagctc
ctctgcgagcaggtcatcggccgcgcgctgcggcgccagtcctacgatctgaacgaggac
gggctcttcaacgtcgagtacgccgacgtgctcggcatccccttcgacttcaccgccaat
ccggtcatcgtcaagccgcagcccccgcgcgagaccatccaggtcaaggccatgcgcccc
gagcgcgaccacctcgagatccgcttcccgcgcgtccagggctaccgcgccgagccgccc
gaggatcggctgacggcggacttcaacgacgactccgtcatgacgctgaccccggagctg
gtcggcgcgaccgagacgcgcaacgccggcatcatcggcgccccgatcgatctcaacctc
gtccataccggtgacgtccgcccgtcccaagtcctctacgagctgacctcccacctgctg
ctgacacgctggcgcgacggcgacgaccagccccagatgcacctcttcggccagctcaag
cgcctcacccagcagtggctcaagacctgcctggtctgcaaaggcggcacctaccccgcc
cagctcaagtacaagaccctggccgatatggcgagcgagcgcatcaccgccgccattacc
cgctcgctggtcggcaagcgcccgatcaaggccgtgctcgacccctacaacccgaccagc
tcgaccctccacgtcaacttcacgacctccaagacggagcggtgggagaccgccgccgac
cgctgccacctcaactgggtgatcctcgacagcgactgggaggccgagttctgccgcatc
gccgagcagcacgagcgagtgatcgcctacgtcaagaatcacaacctcggcctgaccgtg
ccctaccgctacggctccgagacccggacctacctccccgacttcatcgtcctcgtcgac
gacgggcatggccccgaggacccgctccatctcgtcgtcgagatcaagggctaccgccgc
gaggacgccaaggagaagaagtcgacgatggacacctactgggtgccgggcgttaacaat
ctcggcacctttgggcgctgggccttcgccgagttcaccgatgtgttccagatgcaggcc
gactttgcggagaaggtcgcagaggccttcgaggcgatgatcgcgaattttgtcgaagta
ccgctggcaagcaccacggccagcggatga

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