Tuber melanosporum: GSTUM_00005673001
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Entry
GSTUM_00005673001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
tml
Tuber melanosporum
Pathway
tml03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GSTUM_00005673001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tml03032
]
GSTUM_00005673001
03400 DNA repair and recombination proteins [BR:
tml03400
]
GSTUM_00005673001
Enzymes [BR:
tml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GSTUM_00005673001
DNA replication proteins [BR:
tml03032
]
Eukaryotic type
DNA Topoisomerases
GSTUM_00005673001
DNA repair and recombination proteins [BR:
tml03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
GSTUM_00005673001
FA (Fanconi anemia) pathway
GSTUM_00005673001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
BMFP
Motif
Other DBs
NCBI-GeneID:
9185443
NCBI-ProteinID:
XP_002837817
INRA:
GSTUM_00005673001
UniProt:
D5GBK2
LinkDB
All DBs
AA seq
616 aa
AA seq
DB search
MKKVLCVAEKPSIAKAVAGHLSGGVIRNTRNTGNKYIKNYDFNYRFPPPWGECSVTMTSV
VGHTVSWDFADEFRRWKDCQPSALFDAATKQFVSPENKEVAANISSEARNAQILYIWTDC
DREGEYIGTEVMDLAMKSNPRVEVKRAKFSNIERAHILHAAQHPGVLDERQAAAVRARIE
LDLRIGAAFTRWQTMLLQTVRGLDEQVVSYGSCQFPTLGFVVDRYKRVKNFVPEPFWSIR
VIHKRDDINVGFSWDRGSLFDRMAVMVMYEKCLAAKVAKVVSVVKKPTSKWKPLPLTTVE
LQKQGSRFLGLSSQLVMNIAEKLYTQGFISYPRTETDQFDRGMDLRALVGKQTQSHAWGQ
FAQGLMEGGFSQPKNGTHNDKAHPPIHPVAYVAPDKLNADEKRVYEFVVRRFLACCSKDA
RGETTTIKLQYGEEGFHTTGLVVLERNYLEVYVYDKWTSSQELPVFTPGEIFNPTEATMT
EGKTCPPGFLTEPELIALMDANGIGTDATMAEHIAKIIERKYVFARPMGRSGGEFSPSNL
GIALVEGYDNIGFDMSLSKPFLRKEMEEKMKKICEGVMTRLDVVNSSIEQYREMFMKASQ
HSDVLKACAQRYLTPP
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggtcctctgtgtggcggaaaaaccctcgatcgcaaaggctgttgccgggcat
ttgagcgggggtgtcatccggaatacccgaaataccggcaacaagtatattaaaaattat
gactttaattaccggttccccccaccgtggggggaatgtagcgttactatgacatccgta
gtggggcatacggtatcctgggactttgccgatgagttcaggaggtggaaggactgtcaa
ccgtcggcattgttcgatgctgctactaagcagtttgtttctccggaaaacaaagaggta
gccgcaaatatctcttccgaagcacggaatgcccaaattctatatatctggacagattgt
gatcgcgagggggagtacattggcactgaagtgatggatctggcaatgaagagtaatccc
agggttgaagttaaacgagcaaaattttcaaatatcgaacgagcacatatcctgcatgct
gctcagcacccaggggttcttgatgagcgccaggcggcagcggttcgtgctaggattgaa
ttggacctcaggatcggggcggcttttactaggtggcaaacgatgctcttacaaactgtg
agggggttggatgagcaggttgttagttatggctcctgccagttcccgacgttaggattt
gtggtcgataggtataaaagagtcaagaacttcgttccagagcctttctggtcgattaga
gtgatacacaagagggacgatataaatgttggtttcagttgggaccggggttcactattt
gacagaatggccgtaatggtcatgtatgagaaatgcttggctgcgaaggttgcaaaggtg
gtttctgtcgttaagaaaccaaccagtaaatggaaaccactaccgctaaccacagtagag
ctacagaaacaagggagtagattcctcgggctttcgtctcagttggtcatgaatattgcg
gaaaaactatacactcagggcttcataagctatcccagaactgaaaccgatcaattcgat
agaggcatggatctccgggcccttgtaggaaagcagactcaaagccacgcctggggccaa
ttcgctcaaggccttatggagggcggcttctcccagcccaaaaacggcacgcacaacgat
aaagcccaccctccgatccatccagtagcctatgtagccccggataagctgaatgcagac
gaaaagcgagtatatgaattcgtcgttcgacgcttcctagcttgttgttccaaggacgcc
cgtggagaaaccacaacgataaaactccaatacggcgaggaaggtttccacaccacgggc
ctggtagtgctcgaaaggaactacctagaagtctacgtctacgacaaatggacatcatcc
caagaactacccgtcttcacccccggggaaatcttcaaccccacggaagccacgatgaca
gagggcaagacatgcccccccggattcctgaccgagccggaattaatcgctctcatggac
gcgaacggcatcgggaccgacgctacgatggcagaacacattgccaaaatcattgagcga
aagtacgtttttgcccgtccaatgggcaggagtggcggcgaattctccccgagtaacctg
ggcatcgcactagtcgagggttacgataatattgggtttgacatgtcactgagcaaaccg
tttttgaggaaggagatggaagaaaaaatgaaaaaaatctgcgagggagtaatgactcgt
ctggacgtggtgaactctagcatcgagcaatacagagaaatgttcatgaaagctagtcaa
catagcgatgttcttaaggcctgcgcacaacgctacctaacgccaccatag
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