Tuber melanosporum: GSTUM_00007801001
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Entry
GSTUM_00007801001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
tml
Tuber melanosporum
Pathway
tml03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GSTUM_00007801001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00007801001
03009 Ribosome biogenesis [BR:
tml03009
]
GSTUM_00007801001
Messenger RNA biogenesis [BR:
tml03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GSTUM_00007801001
Ribosome biogenesis [BR:
tml03009
]
Eukaryotic type
Pre-60S particles
RNases
GSTUM_00007801001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
9182622
NCBI-ProteinID:
XP_002839726
INRA:
GSTUM_00007801001
UniProt:
D5GH92
LinkDB
All DBs
AA seq
188 aa
AA seq
DB search
MAPGASTAPLVWIDCEMTGLDPNEDVILQICCYITDHELNLLDEEGHETVIHYEKEVLVK
MDDWCQKTHSSTGLISRVLESAVTVTQATEGLLAYIKKHVPEKGIAFLAGNSVHYDRVFL
ARYYPSVVEHLHHRIIDVSTVKEAVKMWCSEEVYGRVPEKKSLHEARMDILESIEELRYY
KRVVFDGK
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaggggcttctactgcaccacttgtgtggattgattgtgagatgacaggacta
gatcctaacgaggatgtcatattgcaaatatgctgctacatcacggatcacgaattgaac
cttctggatgaggaggggcacgagacggttatccactatgagaaggaggttttggtcaag
atggatgattggtgtcagaaaacacactcttctacaggcctcatatcccgcgtcctggaa
tcagccgtgaccgtcacccaggcaacagaggggctcctcgcgtacatcaagaagcatgtc
ccggaaaaaggaatcgccttccttgccgggaattcggtccattacgaccgtgttttcctg
gcgcgctattatccctccgttgtagagcacctgcatcacaggattatagacgtctcgacg
gtgaaggaggcagtgaaaatgtggtgctctgaggaggtgtatgggagggttcctgagaag
aaatcgcttcatgaggcgaggatggatattttggagagtatcgaggaattgaggtattat
aagagagtagtttttgacgggaagtag
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integrated database retrieval system