KEGG   Phaeoacremonium minimum: UCRPA7_7164Help
Entry
UCRPA7_7164       CDS       T03102                                 

Definition
(RefSeq) putative dna ligase 1 protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
tmn  Phaeoacremonium minimum
Pathway
tmn03030  DNA replication
tmn03410  Base excision repair
tmn03420  Nucleotide excision repair
tmn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tmn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    UCRPA7_7164
   03410 Base excision repair
    UCRPA7_7164
   03420 Nucleotide excision repair
    UCRPA7_7164
   03430 Mismatch repair
    UCRPA7_7164
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tmn03032]
    UCRPA7_7164
   03400 DNA repair and recombination proteins [BR:tmn03400]
    UCRPA7_7164
Enzymes [BR:tmn01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     UCRPA7_7164
    6.5.1.6  DNA ligase (ATP or NAD+)
     UCRPA7_7164
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     UCRPA7_7164
DNA replication proteins [BR:tmn03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    UCRPA7_7164
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     UCRPA7_7164
DNA repair and recombination proteins [BR:tmn03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     UCRPA7_7164
   NER (nucleotide excision repair)
    Other NER factors
     UCRPA7_7164
   MMR (mismatch excision repair)
    Other MMR factors
     UCRPA7_7164
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Motif
Other DBs
NCBI-GeneID: 19327897
NCBI-ProteinID: XP_007917889
UniProt: R8BDF1
LinkDB All DBs
Position
Unknown
AA seq 867 aa AA seqDB search
MASPAKKRKLNGDSSQPQTKGLEYFFAKQKQTRISPTPVQTLGAEQTPGLELTDEELARK
LQADWNQEAASAQSGGQFERIDDVDVPQPDVTNASPAVTPKRPASTFSPSPAATTPKLAN
TLSLQSVASVEDTTSASIPLDESPLVFEPSKYAPQLRQAWEAEGGNASYALLTRCFVLVS
STQSRIKIVDTLVNCVRVLIEADPSSLLPAVWLATNAISPPYISLELGLGGSAISKALKQ
VCGLDGRALKTIYDKYGDPGDVAFEAKKKQSFTLRKPKPLTIKGVYQSLVKIAHSQGQGS
VQHKQSIVDRLLQDARGGEESRYIVRTLCQHLRIGAVKTTMLIALSRAFLLSRPADADFP
VRSQQELSSLKKEELAEVYQKAEEIVKACFARRPNYNDLVPVLLEIGISDELLLRCGLTM
HIPLRPMLGSITRDLTEMLTKLQGRDFACEFKYDGQRAQIHCDEKGKVTIFSRHLEVMTD
KYPDLVALMPKIRDDGVGSFIMEGEVVAVDRQNGDLKTFQTLANRARKDVAIGSVTIDVC
MFAFDLMYLNGQPLLDRPFRERRELLRSLFTEVPYQFTWVKSIDATSEDSETVSDFFKQA
TDMKCEGIMVKILDNLPDLIYQGDEQEQNRDETEKLTLTKVDVKPKGKKKKTSDTNGEEK
KKTRRKPLLPTYEPDKRLDSWLKVKKDYHSAFDTLDLIPVAGWHGQGRKAKWWSPILMAC
RNEETGSLDVVTKCMSGFTDAFYKANREFYDDGEDGERQNTRSQKPSFVEYSGPEPDVWF
EPQEVWEMAFADITLSPTYTAAIGLVSDERGLSLRFPRFLRKRDDKSIDEASTSDFLAGL
YKKQGAKAADSAKGSLDGDPDADLEDV
NT seq 2604 nt NT seq  +upstreamnt  +downstreamnt
atggctagcccagcgaagaagcggaaactaaacggcgactccagtcagcctcagaccaaa
ggcttggagtactttttcgcgaagcagaaacagacgagaatttccccgacgcctgtgcaa
actttgggtgcagaacagacaccagggctcgagctgactgacgaggagctggcgaggaag
ctccaggccgattggaatcaggaggcggcgtcagcacaatctgggggtcagttcgagcgg
attgacgatgtggatgtaccgcagccagatgtcaccaacgcctcaccagcagtaactcca
aaacgtcctgccagcactttcagtccatcgccggcagcaacgacgcccaaattggcgaac
acgctgtctttgcagtccgtcgcctccgtggaggacacaacgtctgcctcgattccacta
gatgagagccctctagtatttgaaccgtcaaaatacgctccacagctcagacaagcctgg
gaagcggaaggagggaacgcttcgtatgctctcctaacgagatgttttgtccttgtaagc
agtacacagagtcgcatcaagatcgtcgacactctggtcaactgtgttcgggtattgatc
gaggccgacccatccagcttgcttccggcagtatggctagctaccaatgccatttctccg
ccgtatatctctcttgaattaggattgggtggttcggcaatttcgaaagccctcaagcag
gtctgcgggctcgatggacgtgcattgaaaacaatttatgacaaatacggtgatcctgga
gatgtagcatttgaggccaagaagaagcagagctttaccctacggaaaccaaagcccctc
acaatcaaaggagtctaccagtccttggtcaagatcgcacatagccaaggccaaggaagt
gtacagcacaagcagagcatcgtggatcgcttgctacaggatgctcgtggtggcgaggag
agtagatacattgtacggacactgtgtcagcatcttcggattggtgccgtcaagacgacc
atgctcattgcattgtcccgagcatttcttctgtcgcgaccggcggatgcagactttcct
gtcagaagccaacaagagctatcttctctgaaaaaggaggagcttgctgaggtctatcag
aaggcggaagagattgtgaaggcttgtttcgccaggcgaccaaactataatgaccttgtg
cctgtcctactggagatcggcatttcggacgagctccttctccgttgcgggcttaccatg
cacattccacttcgtccaatgcttggtagtattactcgagatctgacggagatgcttaca
aagcttcaaggtcgagactttgcatgcgaattcaagtacgatggccagagagctcagata
cattgtgatgaaaaaggcaaggtcacaattttctctcggcatctcgaagtcatgacggac
aagtatccagatctcgtcgccttgatgcctaagatccgtgacgatggtgttggtagtttc
atcatggaaggcgaagttgtggcggtggataggcaaaacggcgacctgaagactttccaa
acccttgctaacagggccagaaaggatgtcgctattggcagtgttaccatcgacgtctgc
atgtttgcttttgacttgatgtacctgaatggccaaccccttctggatcgaccttttcga
gaacgccgtgagctcctccgatcattatttacagaggtgccgtatcaattcacatgggtg
aaaagcatagatgcaacatctgaagactctgagaccgtttcagatttcttcaaacaagca
accgatatgaagtgtgaaggcattatggtgaagattttagacaaccttcccgatttgatc
taccaaggcgatgagcaggaacagaatagggatgagacggaaaagcttactctcacgaaa
gtcgacgttaagcccaaaggcaagaagaagaagacatcagatactaacggagaggagaag
aagaaaacacggcgaaagcccctgcttccaacatatgagcccgataagcgccttgactct
tggctgaaagttaagaaggactaccactcagcctttgacaccttggatttgataccagtt
gcgggttggcacggccaaggccgaaaagccaaatggtggtcgcccattttgatggcatgc
cgtaacgaggagaccggatccttggatgttgtcacgaagtgcatgtcaggctttactgat
gcattttacaaagcaaaccgggaattctatgacgatggcgaggacggcgaaagacagaac
actcggtcgcagaaaccgagctttgtggaatattctgggccagagccagacgtgtggttc
gagccgcaagaagtatgggagatggcgttcgccgacatcactctgagcccgacttacacg
gccgcaattggacttgtcagcgacgagcgcggcctgagtctgagattccccaggtttctc
agaaaacgagacgataagagcatcgatgaagctagcacaagcgacttccttgctggtctc
tacaaaaaacaaggagccaaggctgctgactcggcaaagggtagccttgatggggatccg
gatgcagatttggaggatgtttga

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