Tremella mesenterica: TREMEDRAFT_32236
Help
Entry
TREMEDRAFT_32236 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K01899
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.4
6.2.1.5
]
Organism
tms
Tremella mesenterica
Pathway
tms00020
Citrate cycle (TCA cycle)
tms00640
Propanoate metabolism
tms01100
Metabolic pathways
tms01110
Biosynthesis of secondary metabolites
tms01200
Carbon metabolism
Module
tms_M00009
Citrate cycle (TCA cycle, Krebs cycle)
tms_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
TREMEDRAFT_32236
00640 Propanoate metabolism
TREMEDRAFT_32236
Enzymes [BR:
tms01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.4 succinate---CoA ligase (GDP-forming)
TREMEDRAFT_32236
6.2.1.5 succinate---CoA ligase (ADP-forming)
TREMEDRAFT_32236
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ligase_CoA
CoA_binding
Succ_CoA_lig
CoA_binding_2
GFO_IDH_MocA
Motif
Other DBs
NCBI-GeneID:
18492321
NCBI-ProteinID:
XP_007005640
JGI:
Treme1_32236
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MWKNSLRPTSAAVRSSQSFTFHVTCRGIYSALEKDIDGVGSTRTFASTNPRASYEDTIKN
ILIHKDTKVLVQGFTGKTGTFHAQQAIEYGTRMIGGTNPKKAGTEHLGLPVYGSVRDAVK
ASQPDASVIYVPPPFAADAIIEAIENEIKLIVTITEGIPQRDQIKVMNALKSQSKSRMIG
GNCPGIISEGCKMGIMPGHIFKQGKIGVVSRSGTLTYEAVNQTTLVGLGQSLTVGIGGDP
FPGTQHIDVVKVLLSDPRTEGIVLIGEIGGSMEEDAAEYLAAHNTGPNAKPVVAFIAGRT
APPGRRMGHAGAIISGGKGAASDKVKALKAAGAVIADSPAQIGDLMLKAMKEAGKA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagaattctcttagacccacctcggcagcagtccgttccagtcagtcctttaca
ttccacgtcacttgtcgtggtatttattcggccctagagaaagacattgacggtgtaggc
tcgaccaggactttcgcctcaaccaatcctagggcttcatatgaagatacgataaagaac
attcttatccataaagacactaaagtcctcgttcaaggattcacgggaaagactggtaca
ttccatgctcaacaagctatcgaatatgggactaggatgattggagggactaatccaaag
aaagcaggaacagaacatttaggattaccggtctacggttctgttcgtgatgctgttaag
gcctctcaacccgacgcttcagtcatttatgttcctccacctttcgctgcggatgctatc
attgaagctatcgaaaatgagatcaaacttatcgtcaccatcaccgaggggatacctcaa
agagaccagataaaagtgatgaacgctttgaagagtcaaagtaagagtaggatgattggg
ggtaattgtcctggtatcatcagtgagggatgtaagatggggattatgcctggacatatt
ttcaaacagggtaaaatcggcgttgtgtcccgttctggaaccctgacatacgaagctgtc
aaccaaacaaccctcgtcggtctaggtcaatcactcaccgtaggaataggtggtgatccc
ttccccggcactcaacacatagacgtagtcaaagtccttctttctgatcctaggacagaa
ggtatagttctcatcggtgaaatcggtggatcaatggaagaagatgccgcggaatatcta
gcagcacataacaccggtccgaacgcaaaaccagtagtcgcttttatcgctggtcgtaca
gctcctccaggaagacgaatgggacatgctggagcgatcataagtggaggtaaaggtgct
gctagtgataaagtaaaagctttgaaagctgctggtgctgtgattgctgatagtcctgct
cagattggagatttgatgttgaaagctatgaaagaggcggggaaggcatga
DBGET
integrated database retrieval system