KEGG   Trichechus manatus latirostris (Florida manatee): 101347918Help
Entry
101347918         CDS       T05135                                 

Definition
(RefSeq) histone deacetylase 6
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Pathway
tmu05034  Alcoholism
tmu05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09160 Human Diseases
  09161 Cancers: Overview
   05203 Viral carcinogenesis
    101347918
  09165 Substance dependence
   05034 Alcoholism
    101347918
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tmu01009]
    101347918
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tmu03019]
    101347918
   04131 Membrane trafficking [BR:tmu04131]
    101347918
   03036 Chromosome and associated proteins [BR:tmu03036]
    101347918
Enzymes [BR:tmu01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     101347918
Protein phosphatases and associated proteins [BR:tmu01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     101347918
Messenger RNA biogenesis [BR:tmu03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     101347918
Membrane trafficking [BR:tmu04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    101347918
Chromosome and associated proteins [BR:tmu03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     101347918
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl zf-UBP zf-UBP_var
Motif
Other DBs
NCBI-GeneID: 101347918
NCBI-ProteinID: XP_023587640
UniProt: A0A2Y9QWA2
LinkDB All DBs
Position
Unknown
AA seq 1122 aa AA seqDB search
MTSTGQDSTTTGQGRSRHTPHSPPHNSSVILTSKRGVKKGAVPCSSPSLAEVKKKGRMKK
LSQAAEQDLIMGLQELDLNLEPKVLSGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKQQ
LTQEGLLDRCISFQARSAKKEELMMVHSLEYIDLMETTQYMNEVELHILANNYDSVYLHP
NSYTCACLASGSVLRLVDAVLGAEVQNGMAIIRPPGHHARHSLMDGYCMFNHVAVAARYA
QQRHDIQRVLIVDWDVHHGQGRQFIFDQDPSILYFSILHYVHGQFWPHLKASNWSATGFS
QSQGYNINVPWNEVGMRDADYIAAFLHILLPVALEFQPQLVLVAAGYDALQGDPKGNMAA
TPAGFAQLTHLLMGLAGGKLILSLEGGYNCRSLAEGVSASLHTLLGDPCPMLESPGAPCL
SARTSISCTLVALEPFWEVLMQSAETLEEDYVENDKEEGPWEPPVPQILAWPVLRARTGL
VYDQRMMSHYNLWDNHHPEMPQRISRIMYHLEELGLAERCLTLPARPATDAELLTCHSAE
YMARLRATENMKTRELHREGASFDSIYICPSTFTCAQLATGAVCRLVEAVLAGEVLNGTA
VVRPPGHHAEWDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGTQHIFEDD
PSVLYMSLHRYDHGTFFPMGNEGASSQIGQAPGMGFTVNVAWNGPRMGDPEYLAAWHRLV
LPVAYEFNPELVLVSAGFDAAQGDPLGGCQVSPEGYAHLTHLLMGLANGRIILILEGGYN
LTSISESMAACTRTLLGDPPPLLAPLRPPLSGALASISETIHIHHRYWRSLRIKKVEDKE
EETSNSELVTKEPQPANPGSAEGMATPEENILEAGTRKATSASPVEGSTLGQAKSETAVM
ELTQDKSLEAATGGAVLDQTTSEGPVGDTKLASRTDNQTTPSSPVQETTPHISPSNLIES
LRTLELSNKAQKAPDSQTPEEEKLLGEAAGGRRDLDDSMLMGFGDTDKATFYAVTPLPWC
PHLMAVCPIPATGLDVTQPCRDCGSLQENWVCLSCYQVCCGRYINAHMIQHHEDSGHPLV
LSFVDLSTWCYHCQAYVHHQALLDVKNFAHQNKFGEDMPQPH
NT seq 3369 nt NT seq  +upstreamnt  +downstreamnt
atgacctccaccggccaagattccaccacaaccggacagggaaggagtagacacaccccc
cactcaccaccccacaactccagcgtcatcctcacctcgaagcgaggtgttaagaagggt
gccgtaccctgctccagccccagtctagcagaggtaaagaagaaaggcagaatgaagaag
ctcagccaagcagcagagcaagacctaatcatggggcttcaagagctggatctgaacctt
gagcccaaggtactgtctggcacaggcttggtatttgatgagcagctaaatgaattccac
tgcctctgggatgacagcttccctgaaggccccgagcggctccatgccatcaagcagcag
ctgacccaggagggcctcctggatcgctgtatctccttccaggctcgatctgccaaaaag
gaggagctgatgatggttcacagcctagaatacattgatctgatggagacgacccagtac
atgaatgaggtggaactccacatcctggcaaacaattatgactcagtctacctgcatcca
aactcatacacatgtgcctgcctggcctcaggctctgtcctcaggctggtggatgcggtt
ctgggggccgaagtacagaatggcatggccatcatcaggcctcctggacaccatgcccgg
cacagtcttatggatgggtattgcatgttcaaccatgtggccgtggctgcccgctatgct
cagcagaggcatgatattcagagggtccttattgtggattgggatgtgcaccatggtcaa
ggaagacagttcatctttgaccaggaccccagcatcctctatttctccatcctccactat
gtgcacggccagttctggccccaccttaaggcctctaactggtccgccacaggcttcagc
caaagccagggatacaacatcaatgtgccttggaacgaggtggggatgcgagatgctgac
tacattgctgcgttcctgcatatcctgctgccagtcgcccttgagttccagccccagctg
gtcctggtggctgctggatacgatgccctccaaggggaccccaagggcaacatggctgcc
actccagcagggttcgcccagctgacccacctgctcatgggtctggcaggaggcaagctg
atcctgtctctggagggtggctacaactgccgctccctggctgagggcgtcagtgcctcg
ctccacacccttctgggagacccttgtcccatgctggagtcccctggcgccccctgcttg
agtgcccgaacttcgatctcctgcactttggtagccctcgagcccttctgggaggtcctt
atgcaatctgctgagaccctcgaggaggactacgtggagaacgacaaggaggaggggccg
tgggagccccctgtgccccaaatcctggcctggccagtgctgcgcgctcgcacggggctg
gtctatgaccagcgtatgatgagtcactacaacttatgggacaaccaccaccccgagatg
ccccagcgcatctcgcgaattatgtaccatctggaggagctgggcctcgctgagcgctgc
ctcaccctgcctgcacgccctgccacagatgctgagctgctcacctgccacagtgctgag
tacatggctcgtctgcgagccacggagaacatgaaaacccgggagctgcaccgtgagggc
gccagctttgactccatctacatctgccccagcaccttcacctgtgcgcagctcgccact
ggtgctgtatgccgcctagtggaggctgtgcttgctggagaggtactgaatggtactgcc
gtggtgcgccccccaggacatcatgcagagtgggatgctgcgtgcggtttctgctttttc
aactctgtggcggtggctgctcgccatgcccaggccatcagtgggcatgccctgcggatc
ctgattgtggattgggacgtccatcatggtaatggaactcagcacatatttgaggatgac
cccagtgtgctctacatgtcccttcaccgctatgatcatggcaccttcttccccatgggg
aatgagggtgccagcagccagattggccaggcccccggcatgggcttcactgtcaacgtg
gcctggaatgggccccgcatgggtgaccccgagtacctggctgcctggcatcgtctggtg
cttcccgttgcctatgagtttaacccagaactggtgctggtctcagctggctttgacgcc
gcacagggagaccccttggggggttgccaggtgtcacctgaaggctatgcccacctcacc
cacctgctgatgggccttgccaacggccgcattatcctaatcttagagggtggctataac
ctgacatccatctcagagtccatggctgcctgcactcgcaccctccttggggacccacca
cccctgctggcccctctgcggcccccactatcaggggccctggcctccatctctgagact
atccacatccatcacagatactggcgtagcttgcggatcaaaaaggtagaggacaaggag
gaggaaacctccaattctgagctggtcaccaaggagcctcaaccagccaatcctgggtca
gccgaggggatggccacgccagaagaaaacattctggaagcaggcacgaggaaggctacc
tcagcatcacccgtggaagggtccactctaggccaggctaagtcggagacagccgtgatg
gagctcactcaagacaagtccttggaggcagccaccggcggggctgtgctggaccagacc
acctcagaggggcctgtgggggacaccaagctagcttcacgcactgacaaccagaccacc
ccgtcctcacctgtgcaggaaaccacccctcacatatcacccagtaacctgattgagagt
ctcaggaccttggaactaagcaacaaggctcagaaggccccagattctcagaccccagaa
gaggagaagctactaggagaggcagctggcggtcgtcgggacctggatgattccatgctg
atgggctttggggacactgacaaggccaccttttatgctgtgacaccactgccctggtgt
ccccatttgatggcagtctgccccatacctgcaacaggcctggacgtgacccaaccctgt
cgggactgtggatccctccaggagaattgggtgtgtctgtcttgctatcaggtctgctgc
ggtcgttacatcaatgcccatatgatccaacaccatgaagactcaggacacccgctagtt
ctcagcttcgttgacctgtctacctggtgttaccactgtcaggcctatgtccaccaccag
gctctcctagatgtgaagaatttcgcccatcagaacaagtttggggaagacatgcctcaa
ccacactaa

DBGET integrated database retrieval system