Trichechus manatus latirostris (Florida manatee): 101350860
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Entry
101350860 CDS
T05135
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03460
Fanconi anemia pathway
tmu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101350860
09124 Replication and repair
03460 Fanconi anemia pathway
101350860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tmu04121
]
101350860
03400 DNA repair and recombination proteins [BR:
tmu03400
]
101350860
Enzymes [BR:
tmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101350860
Ubiquitin system [BR:
tmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101350860
DNA repair and recombination proteins [BR:
tmu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
101350860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
FANCL_d1
FANCL_d2
zf-RING_2
SLX1_C
zf-RING-like
zf-rbx1
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
101350860
NCBI-ProteinID:
XP_012412252
UniProt:
A0A2Y9FY24
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MTGPGVKDYECLEVDDIASSEVQRVDLDNESVGTPPTQPTLDLHFRFRLRRPPGVFPPTL
GFPPLGAPGGSGTAHVRGPVLFLTRLRLRGRRALAVMETSLLRQCPLLLPQNREKTVYEG
FISAQGRDFHLKILLPEDLQMKNARLLCSWQLRTILNGYHQIIQQRMQHCPDLVSFMMEL
KMILEVALKNKQELHAPPPPPQFYSRLIHELGTLGWDKVVYMDTGFSTFKLKAQDASGRE
HLITLKLKAKYPAESPDCVVDFPVPFPISWTPQSSLKSIHSQFLAALDSLKAFWDVMDEI
DEKTWVLEPEKPTRSATARRIALGTNTSINIEVDPRHPTMLPECCFLGADHVVKPLGIKL
SKNIHLWDPENTLLQNLKDVLETDFPARAVLDRPDFTMDCGICYAYQLDGVIPDQVCDNP
QCGQPFHQTCLYEWLRGLLTSRQSFNIIFGECPYCSKPMTLKMSGRKP
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgactggtcctggcgtgaaggactatgaatgtttggaggttgatgatattgcttcaagt
gaagtgcaaagggtggatttagataacgagtcagtaggaaccccgcccacccagccaaca
ctagacctccacttccgcttccgcctgcggaggccgccaggcgttttcccgccaacgctc
gggtttccgcctcttggggctccgggaggcagcgggacagcgcatgtgcggggtccggtc
ctgtttctaactcgcctgcggctccgcggacgccgagctctggcggtgatggaaacgagc
ctgctgcgccagtgcccgttgcttctgcctcagaaccgagagaaaaccgtctatgaggga
ttcatttcggctcagggaagagacttccaccttaaaatattgttgcctgaagatttgcaa
atgaagaatgcaagattactgtgtagttggcagctgagaacaatcctaaatggataccat
caaataatacaacagagaatgcagcactgtcctgatctagtgagctttatgatggagttg
aagatgattttggaagttgctttaaagaataaacaggagctgcatgcaccaccaccccct
ccccagttctactcgcgccttattcacgagctgggaaccctcggctgggacaaagtcgtg
tatatggatactggcttcagcaccttcaagttaaaagcccaagatgcttctggtagagag
catctgatcactctcaagttgaaggcgaagtatccagcagaatccccagattgtgttgtg
gattttcctgttccgtttcccatttcttggacaccacagagctccttaaaaagcattcat
agtcagtttttggcagcgttagactcactgaaggcattctgggatgttatggatgaaatt
gatgagaagacctgggtacttgagccagaaaaacctacaaggagtgcaacagctcgaagg
attgcattagggactaacacatcaataaacatagaggtggacccccgacaccccactatg
cttcctgagtgctgctttctgggagctgaccacgtggtgaaacccctgggaattaagcta
agcaagaatatacatttgtgggatccagaaaatactctgttacaaaacttgaaagatgtt
ttagagactgattttccagcccgtgctgtcctggacagaccggatttcactatggattgt
ggaatttgctatgcttatcaacttgatggtgtgattcctgatcaagtgtgtgacaacccc
cagtgtggacaacctttccatcaaacgtgcttatacgagtggttgagaggactactgact
agtaggcagagttttaacatcatatttggtgaatgtccatactgtagtaagccaatgacg
ctgaaaatgtctggaaggaagccctga
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