Trichechus manatus latirostris (Florida manatee): 101351236
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Entry
101351236 CDS
T05135
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X2
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03013
Nucleocytoplasmic transport
tmu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101351236
03015 mRNA surveillance pathway
101351236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101351236
03041 Spliceosome [BR:
tmu03041
]
101351236
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101351236
Spliceosome [BR:
tmu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
101351236
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
101351236
NCBI-ProteinID:
XP_004377161
UniProt:
A0A2Y9DN25
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATS
TSDILKVPKPEPVPEPKEPSPEKNSKKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRH
RSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSS
SSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNR
TRKSRVSVSPGRTSVTKHKVTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQ
YRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRM
QMGKRWQSPMTKSGRRRRSPSPPPTRRRRSPSPAPPPRRRRSPTPPPRRRTPSPPPRRRS
PSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTK
RRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQSTSSPPPVRRGASSSPQR
RQSPSPSTRPIRRVSRTPEPKKTKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPQAPPSP
VQSQSPSTNWSPAVPVKKAKSPTPSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKK
HKKEKAVAAAAATPAAIAAPTTTSAQEEAAAEPEPKKETESEAEDNLDDLEKHLREKALR
SMRKAQVSPQS
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggatttttccgcggaacaagtgcagaacaggataatcggttcagcaacaaa
cagaagaagctactgaagcagctgaaatttgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacagaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactgggtttttgaatggaaaaaatgctagagaa
tttatgggagaactgtggcccctgctgttaagtgcacaagaaaacatcgctggaatccct
tctgctttcctagaactgaaaaaagaagaaataaaacagagacaaattgaacaagaaaaa
ttggcatctatgaaaaagcaagatgaagacaaagataagagagataaggaggaaaaagaa
agcagcagggaaaaaagggagaggtctcgaagcccaagaagacgcaaatccagatctcct
tcccctagaagacgatcttctcctgtcaggagagagagaaagcgcagtcattctcgatct
ccccgtcacagaaccaagagccggagtccttcccctgctccagaaaagaaggagaaaact
ccagagctcccagaaccttcagtgaaagtaaaagaaccttcagttcaagaggccacttct
actagtgatatcttgaaagttcccaagcctgaacctgtaccagagcctaaagaaccttct
ccagaaaaaaattctaaaaaggaaaaggagaagactcgaccaagatctcgctctcgttcc
aaatcaaggtcccggacgcgttctcgctctccttctcatactcgacctagacgacgtcat
agatcccgatcaagatcatactcacccagaaggcgacccagcccaagaagacgaccatct
cctagaagaagaactccaccaagacgaatgcctcctccaccaaggcataggaggagcaga
tctccagtgagacgaagaaggcgctcatcagcatccttgtctgggagtagctcatcatcc
tcttcatctcgttcccggtcaccgccaaagaaaccacccaagagaacatccagcccccct
cgaaaaactcgtaggttgtctccttcagcaagtcctccaaggcgacggcaccgaccatca
cctccagcaactccaccaccaaaaactcgtcattccccaacaccccagcagtcaaaccgt
acaagaaaaagtcgtgtttctgtctctccagggagaacttcagtgacaaaacataaagtt
actgagaaaagggagtccccttcaccagcacccaagcctagaaaagtagagttatctgaa
tcggaagaagataaaggtggcaaaatggcagcagcagattctgtgcagcagagacgccag
tacagacgacaaaaccagcagtcttcatctgactctgggtcttcgtcctcctcagaagat
gagcggcccaagaggtcccacgtgaagaatggtgaggtaggcaggcggcggagacattcc
ccgtcccggagtgcctctccatcaccacgaaagcgtcagaaagagacttcccctcggatg
cagatgggaaagcgatggcaatcgccaatgactaaaagtggtagacggaggagaagtccc
tccccaccacccaccagaaggcgacgttctccttcacctgctcctcctcctcgacgacgc
aggtctcccacaccaccaccacggcgaaggactccttctcctcctccacgtcggcgctca
ccttccccaagaagatattctcctccaatacagaggagatactctccttctccacctcca
aagagaagaacagcttctccccctccccctcctaaacgaagggcatcaccatctccaccg
ccaaagcgtagggtttcccattctccacctcccaaacaaagaagctccccagtcaccaag
agacgttcaccttcattatcatcaaagcataggaaagggtcttccccaagccgatctacc
agggaagcccgatcaccacaaccaaacaaacggcattcgccctcaccacggcctcgagct
cctcagagcacctcaagtcctccccccgttcgaagaggagcatcatcatctccccaaaga
aggcagtccccttctccaagtactagacccattaggagagtctccaggactccagaacct
aaaaagacaaaaaaggctgcctcaccaagccctcagtctgtaaggagggtctcatcctct
cgatcagtctcaggatctcctgagccagcagctaaaaagccccaagcacccccatcccct
gtccagtctcagtcaccctctacaaactggtcaccagcggtaccggtcaaaaaggctaaa
agcccaacaccaagcccatcaccggcaaggaattcagaccaagaaggaggtgggaagaaa
aagaagaaaaagaaggataagaaacacaaaaaggataagaagcacaagaagcacaaaaaa
cacaagaaggagaaggctgtggctgcggctgctgcaactcctgcagccattgctgctccc
acaaccacatcagcccaggaagaagcagcagcagagccagaacctaagaaggagactgaa
agtgaagcggaagataaccttgatgaccttgaaaagcacctgcgtgaaaaggccctgaga
tcaatgcggaaggctcaagtgtccccacagtcttag
DBGET
integrated database retrieval system
