KEGG   Thermotoga maritima Tma200: THMC_1677
Entry
THMC_1677         CDS       T03901                                 
Name
(GenBank) DNA repair protein Rad50
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
tmx  Thermotoga maritima Tma200
Brite
KEGG Orthology (KO) [BR:tmx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tmx03400]
    THMC_1677
DNA repair and recombination proteins [BR:tmx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     THMC_1677
    Archaeal homologous recombinant proteins
     THMC_1677
SSDB
Motif
Pfam: AAA_23 SMC_N AAA_15 SbcC_Walker_B AAA_21 AAA_27 AAA_29 ATG17_like Seryl_tRNA_N ABC_tran Syntaxin DUF6364 BRE1 RsgA_GTPase
Other DBs
NCBI-ProteinID: AKE27521
LinkDB
Position
1613549..1616107
AA seq 852 aa
MRPERLTVRNFLGLKNVDIEFQSGITVVEGPNGAGKSSLFEAISFALFGNGIRYPNSYDY
VNRNAVDGTARLVFQFERGGKRYEIIREINALQRKHNAKLSEILENGKKAAIAAKPTSVK
QEVEKILGIEHRTFIRTVFLPQGEIDKLLISPPSEITEIISDVFQSKETLEKLEKLLKEK
MKKLENEISSLQALYTAIWKYLEENDLEVLKSELKTVSEKKKELLKKREELQKEEEQLKR
LLEKYRELVKKKERLRVLSLRRNELQKEVIYEQKVKKAKELEPLFREIYLRQREFERFSQ
ELNSREKRYKELESEKEAISKEIPVHRERLSKLEEIGEKIKEELDLLEKVLKASRPLLEQ
RIRLKENLTRLEEEFRRLVGEKEKREKELLSIEKTENETKNELEKLLDELSILKKDHMKW
LAYQIASSLNEGDTCPVCGGVFHGKVEAVEFNIDEFEKLDQKRSELENTLNVLKERKKSL
SSLIEDLLMKIEEGKKNLKSIRNQIEKIEEELHRLGYSEDLEEKLDEKRKKLRKIEEERH
SISQKITAADVQISQIENQLKEIKGEIEAKRETLKEQREEMDQLKSDFFDRLRKIGIGFE
EFRILVKEEVKDAEKELGVVETEIRLLEESLKELESENVRDVSEDYEKVRNQLEALSQEI
SDLERKEGRLNHLIEETLRRERELKSLEKKLKEMSDEYNNLDLLRKYLFDKSNFSRYFTG
RVLEAVLKRTKAYLDILTNGRFDIDFDDEKGGFIIKDWGIERPARGLSGGERALISISLA
MSLAEVASGRLDAFFIDEGFSSLDTENKEKIASVLKELERLNKVIVFITHDREFSEAFDR
KLRITGGVVVNE
NT seq 2559 nt   +upstreamnt  +downstreamnt
gtgaggcctgaaagactcaccgttagaaactttctcggactgaaaaacgtcgatatagag
ttccagagcggaataacggttgtagagggtcctaacggtgcagggaagtcgtccctcttc
gaagccatttctttcgcacttttcgggaacgggataaggtatcccaactcgtacgattac
gtgaacaggaacgccgtcgatggaactgcccgtctcgtgtttcaattcgaacgtggaggg
aaaagatacgaaatcataagagagataaatgccctgcagagaaaacacaacgcgaagctc
tccgagatactggaaaacggaaagaaagcggccatagctgcaaaacctaccagtgttaag
caggaagtggaaaaaattctgggaatagaacacagaaccttcataagaacggttttcctc
ccacagggggaaatagacaagcttttgatttctcctccatcggagatcaccgagatcatc
tccgatgttttccaaagcaaagaaacactcgaaaagctggaaaaactcctcaaagagaaa
atgaaaaagctggagaacgagatatcctcattgcaagctctctacaccgctatctggaaa
tatctggaagagaacgatctggaagttctgaagagcgagctgaaaaccgtctcggagaaa
aagaaagaacttctcaaaaaaagagaagaactccagaaagaagaagagcagctcaagagg
cttcttgaaaaatatcgggaactcgtgaaaaagaaagagaggctcagggtgctttctctg
agaaggaacgaattgcaaaaagaagtgatctacgaacagaaggtgaaaaaagcgaaagaa
ctggagccgctctttcgagaaatctatctcaggcagagggaatttgagaggttctcacag
gagctgaacagcagggaaaagagatacaaagaactcgaaagtgagaaggaagcgatctca
aaagaaatccctgttcacagggaaagactttccaagctggaggagataggagagaagatc
aaagaagagctggatcttcttgaaaaggtcttgaaggcctctcggccgcttcttgagcaa
agaataagattgaaagaaaatctcacgaggctcgaggaagagttcagaagactcgttgga
gaaaaagaaaagagggaaaaagaactgctttctattgaaaagacagagaatgaaacgaag
aatgagctggaaaaactactcgatgaactttcgattttgaagaaagaccacatgaaatgg
ctggcctatcagatagcttccagtctgaacgaaggtgatacttgtcctgtatgcggtgga
gtgttccatggaaaagtggaagccgtcgaattcaacatcgatgaattcgagaagctcgat
caaaaaagaagcgaactggaaaacaccttgaacgttctgaaagagagaaagaaaagcctt
tccagcctcatagaggatcttctgatgaaaatcgaagaggggaagaaaaatctgaagagc
attcgaaatcagatcgaaaaaatcgaagaagaactgcacagattgggttattcggaagat
ctggaggaaaaactggatgaaaaaagaaaaaagctcagaaaaatagaagaagagaggcat
tctatttcccaaaagatcacagcggccgacgttcagatttcacagatcgaaaaccagctg
aaagaaataaaaggagagatcgaagccaaaagggaaactctgaaagaacagcgcgaagag
atggaccagttgaaaagtgatttcttcgatcgtttaaggaagatagggatcggcttcgaa
gagttcaggatcctcgtcaaagaggaagtaaaggacgcggaaaaagaattgggagttgta
gagacggagatcaggcttcttgaggaaagcctgaaggagctcgaatcagagaatgttcga
gatgtgagtgaagattacgaaaaggttcgaaatcaactggaagctctctcacaggaaata
tcggatcttgagagaaaagaaggacggctcaatcatctcatcgaagaaacactcagaaga
gagcgagagttgaagagtctggagaagaaactaaaagagatgagcgatgaatacaacaat
ctggatcttctgaggaaatatctgttcgataaaagcaacttctcgagatacttcacaggg
agagttctcgaagcggtcctgaaaagaacgaaggcatatctcgacattctgacgaacgga
aggttcgacatagattttgacgacgaaaaaggtggttttatcataaaagattggggtatc
gaaagaccagcgaggggactttccggtggggaaagagctctcatttccatatctcttgcc
atgtcccttgcggaggtggcctccggcagactggacgcgttcttcatcgatgaagggttt
tccagtctcgacacggagaacaaagagaagatcgcttccgttttgaaggaactcgaaaga
ttgaacaaggtgatcgttttcatcacgcacgacagggagttctcggaggctttcgacagg
aagctgagaataacgggaggagttgtggtgaatgagtga

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