Tetraodon nigroviridis (spotted green pufferfish): GSTEN00004828G001
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Entry
GSTEN00004828G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
GSTEN00004828G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tng03000
]
GSTEN00004828G001
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00004828G001
03036 Chromosome and associated proteins [BR:
tng03036
]
GSTEN00004828G001
Enzymes [BR:
tng01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
GSTEN00004828G001
Transcription factors [BR:
tng03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
GSTEN00004828G001
Ubiquitin system [BR:
tng04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
GSTEN00004828G001
Chromosome and associated proteins [BR:
tng03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
GSTEN00004828G001
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
GSTEN00004828G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JmjC
F-box
Cupin_8
PHD
C1_1
LRR_4
JHD
Motif
Other DBs
NCBI-ProteinID:
CAF90519
UniProt:
Q4T9B3
LinkDB
All DBs
Position
undetermined
AA seq
1251 aa
AA seq
DB search
MTMASLTKRSTAGGRLTWRRKSTVRGSVLNCRMPDPDFTVNDVKMFVGSRRMIDVMDVST
QKGTEMSMAQWTRYYETPLSQREKLYNVISLEFSHTKLENLVRRPTTVDLIDWVDNMWPR
HLKERQRDSTNSITDMQYPKVQKYCLMSVEGCYTDFHIDFGGTSVWYHILRGSKVFWLIP
PTPQNLELYENWVLSGKQGDVFLGDRASDCQRIELKQGYTFIIPSGWIHAVYTPVDSMVF
GGNFLHSFNIPTQLNICNIEDRTRVCRGTLEESNKTGTFRIFKHIMLSLQVPTKFRYPFY
YEMCWYVLERYVFSLTKTSYLTPEFQRHSLGIGLKKPCKLANEKGILEDEESSEDEVQRE
HSDEAAAKIHLTPLELEGLWNLLGKLEDLPPNKKCIPSGIHNFQALVAHIKALLKEHAND
NPKLSYTGKPIITWPKRVRSSDISPERLIFHLFTSHVPYLTCFALVYQPSWYQPPPPPPP
PPPRPKLATISIIPRPQKPASSMSVLRRRRVRCKRCEACVRSECGDCNFCRDMKKFGGPG
KLKQTCVLRQCLSVSRLRPRLLRKRPRGDRLWVPFQPGLPLSAVCEVCKEPNQDETGDTS
LTLMECSNCAQIVHPACLTIQGEGLINKDLPSCWECPRCVQGVTDPEQSKGDRGDGLSLK
RKSSTLLDARMAKIYRQQRHSRDEDDSGSDDEDAVSQRRRMTLNVRGGAHSSRRGFGANR
RGLLRGGSSHRGSRGALMGHGSFRLKRGMAMRESGRRGRGVRLRGGSRMQRRGEDSEESE
DDEEDDEEEEADSEDGGKERHRRRRRRRTDDQDDDGDDDEEEEDEDDSEGQDFDPEEEMD
MVEDDEEEMDEEEEGLWDSDREPPVLLMSDLNDDLLSGSYLTVTLQRPDKAKKQTGSIVP
KLEAAMGPRTAAGASGPQHAFIQRRTALSKHIPARLGDGPNDWATPRGPGRKDFSALSSE
EEHTVAPSLSLLSLPSFKDVGNDSGGEKEVWVSVFTYLNRAELLACMTVCKAWYKWSCDK
RLWSHIDVSRCSPLSNQALAGIIKRQPYSLDLSWTPLAKRQLNCLLTRLPGLRELRVAGL
AWSCLSALVSPTLPCLQLLDLRWCEGIKDAQIKDLIIPPGSESSRSRLRNLVTLRLSGLD
ISESILKLLQRHMTQLERLELSHCKNITDSSVALLAAPGTHTRNNLTELTLAGCNELTDC
CLLYMKRLSSLTLLDLRGCKSVSRRACDAFIADLSHISLYCMMEEKLIQRI
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggcatctctgacgaagagatcgacggcaggaggacgtttaacctggaggaga
aagtcaacagtcagaggttcagttctgaactgcaggatgcctgatcctgacttcacagtg
aacgatgtcaagatgtttgttggcagtcgaagaatgattgacgtaatggacgtcagcacc
caaaagggaacggagatgtcgatggcccagtggacgcgttactatgaaacgccgctgtct
cagagagagaagctctataatgtcatcagcctggagttcagccatacaaagttggagaat
ctagtcaggagacctacaacagtagatctcatagactgggtggacaacatgtggccccga
cacctgaaagagagacagagggactcgaccaactctatcactgacatgcagtatcccaaa
gtacaaaagtattgcctgatgagtgttgagggctgctataccgattttcacattgacttt
ggtggaacttcagtgtggtaccacattttgagaggaagcaaggttttctggctaatccca
cccacacctcagaacctggaactgtatgagaactgggtcctatccgggaagcagggagat
gttttcttgggagaccgagcatctgactgccaaaggattgaactaaagcagggctacacc
ttcatcataccctcgggctggattcacgctgtttacacccctgtggattccatggtgttt
ggaggaaacttcttgcacagcttcaatattccaacgcagctaaacatctgcaacattgaa
gacagaacgcgggtatgtcggggcacgttagaagaaagtaataagactggtacttttaga
atttttaagcacattatgctttctctccaggttccaactaagttccgctaccctttctat
tatgaaatgtgctggtatgtgttggagcgatacgtctttagcctgaccaagacgtcttac
ctcaccccagagtttcaaagacactcattaggcattggtctgaagaaaccatgcaagtta
gccaatgaaaaggggatattagaagatgaagagtccagtgaagacgaagtgcaaagggag
cattctgacgaagcagcagctaaaattcatctaacccctctggagctggaagggctctgg
aacctgctgggcaaactggaggatttgcctcccaacaagaaatgtattccatcaggaata
cacaactttcaagcactcgtcgcacatattaaggctctgttgaaggaacatgcgaatgac
aaccccaaactgtcctacacaggaaagcccatcatcacatggccaaagagagtacgttct
tctgacatatcgcctgagagactgatatttcatctgttcacaagtcatgttccttacttg
acttgttttgcccttgtttaccagccctcgtggtaccagcctccaccaccaccgcctcct
cccccacctcgtcctaaactggccaccatatcgatcatcccacgcccacaaaagccagct
tcctccatgtctgtgctgcggaggcgaagagtcaggtgtaagcgctgcgaggcctgcgtt
cggtcggagtgcggagactgtaacttctgcagagacatgaagaaatttggcggaccaggg
aagctgaagcagacctgcgtcctgcgacagtgtctttctgtaagtcgccttcggcctcgt
ttgttgcgaaagcgtccgcgtggtgaccgtctctgggtccctttccagccgggacttccg
ctgtctgcagtctgcgaagtctgtaaggagcccaatcaagacgagacgggggacacgtcg
ctcaccctgatggagtgttcgaactgtgcccagatcgtccatccagcctgtctcacgatt
cagggcgaaggcctgataaataaagaccttcccagttgttgggagtgtccaaggtgcgtc
caaggtgtcactgacccagagcaatcgaagggagacagaggtgacggcctctcactgaaa
agaaaatcctccactctgctggacgctcgtatggcaaagatttaccgccaacaaagacac
agtcgcgacgaagatgattccggcagcgatgatgaggatgcagtttcccagaggagaaga
atgacactaaatgtccgcggtggggctcactcttccaggaggggcttcggagccaacagg
aggggcttgttgagagggggttcttcccacagagggagcagaggagctctcatgggtcat
ggatccttcaggttgaagcgagggatggccatgagggagagcgggcggagggggaggggg
gtccgactgcgaggtggctcccggatgcagaggaggggggaggactccgaggagtcggag
gacgacgaagaggacgacgaagaggaagaggctgacagcgaggacgggggcaaggaacga
catcggcggcgtagaagacggaggactgatgaccaagacgacgacggcgacgacgatgag
gaagaggaggacgaggatgacagcgaggggcaggactttgaccctgaagaggagatggac
atggtggaagatgatgaggaggagatggatgaagaggaagaaggcctgtgggattcggac
agagagcctcctgtcctgttgatgtccgatctgaacgatgacctgctcagcggttcgtac
cttaccgttaccctccagcgccctgacaaggccaaaaagcagaccggctccatagttccg
aaactggaggcagcaatgggtccgaggacggctgcaggggcttctgggccccagcatgct
ttcattcagaggaggacggctctgtccaaacacataccagccaggctcggagacggtccg
aatgattgggcgacgccaagaggacccggcagaaaggatttctctgcgttgtcttcagag
gaggagcacaccgttgcgccctcgctgtctctgctgtccctgccatctttcaaggatgtg
ggcaacgacagtgggggggaaaaggaagtgtgggtgtctgttttcacgtacctcaaccga
gccgagctgctggcctgcatgactgtgtgcaaggcctggtacaaatggagctgtgacaag
cgtctgtggagccacatagatgtgagtcgctgtagtccacttagcaaccaggcactggcg
ggcatcatcaagcgccagccctactccctggacctgtcctggaccccactggccaaaagg
caactcaactgcttactcactcgacttcccggtctgagggagctcagagtagcgggttta
gcctggtcctgtctgtcggctctcgtctctccaaccctgccctgtctgcagcttctggac
ctgcgctggtgcgaaggcattaaagacgcgcagattaaagatctgatcatcccaccgggt
tccgagtcgtcccgtagccgactgagaaacctggtgacgctacgtctgtctggcctggac
attagcgagtccatcctgaagctactgcaacgccacatgacacagctggagaggctggaa
ctgtctcattgtaaaaatatcaccgactcatcagtggcccttctggcagccccagggacg
catacccggaacaacctgactgagctgacgctggccggttgcaacgagctgaccgactgc
tgcctgttgtacatgaagcgtctgtcgtctctgactctgttagacctacgcggatgcaag
agcgtcagcagacgagcatgtgacgctttcatcgccgatttgtcccacatctccctctac
tgcatgatggaagagaagctgatccagcgaata
DBGET
integrated database retrieval system
