Tetraodon nigroviridis (spotted green pufferfish): GSTEN00012482G001
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Entry
GSTEN00012482G001 CDS
T04346
Definition
(GenBank) unnamed protein product
KO
K10140
DNA damage-binding protein 2
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03420
Nucleotide excision repair
tng04115
p53 signaling pathway
tng04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
GSTEN00012482G001
09124 Replication and repair
03420 Nucleotide excision repair
GSTEN00012482G001
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
GSTEN00012482G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00012482G001
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00012482G001
Ubiquitin system [BR:
tng04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
GSTEN00012482G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
GSTEN00012482G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-ProteinID:
CAF95721
UniProt:
Q4SUG1
LinkDB
All DBs
Position
undetermined
AA seq
485 aa
AA seq
DB search
MRNKSDRPNASTNKVAKRSDSSASSQPKTPKSKMQSWKREAPEPAATNRSVRGSILHYIY
QNTLGQSLRSQTRRCLQEPFVRSLASYHFHGATCPFDRRVTCLEWHPTRPTTLAAASKGG
DLYLWDYMRPAKANFIQGNGAGDSIGGMKFCPMDPSKIYVASGEGRLDLMSFEGCTPTVL
ATNVDSYHDNHVCFWFCCVDVSVSRQMLVTGDNVGQLLLLSLDGQKIFKEKLHKAKVTHA
EFNSRCDWLLATASVDHTVKLWDLRNMKDKKSFLHELPHEKAVNSAYFNPLDCSKLLTTD
QYDQIRVYSSSDWSTPQQIIRHPHRHFQHLTPIKATWHPVYDLIVAGRYPDNRICLSDKR
TVDLYDANTAELVCQLQDPTVAGIKSINKFNPLGDVIGSGMGVTVVLWNRNESLLNQLEE
EETSTPMGGRGNHWRGEQPPRRGRGGPSGDGKTTKRKLASPEKTGARSKTTTSNTREKQP
QRRKT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagaaataaatcggacagaccaaatgcgtcaacaaacaaagtggcaaagaggtccgac
agctcggcttcgtcgcagcctaaaacgcctaaaagcaaaatgcagtcgtggaaacgagag
gctccggagcctgccgcgaccaacaggagtgtccgtggaagcatcctgcactacatttac
cagaacacactggggcagagcctgcgttcgcagacgagacggtgtcttcaggagccgttt
gttcgctcgctggcctcttatcacttccacggtgccacctgcccttttgaccgcagggtc
acctgtctggagtggcaccccacccgtcccaccaccctggccgcagcatcaaagggtgga
gatttgtatctgtgggactacatgaggcccgccaaagccaacttcatccaggggaacgga
gccggagattctatcggggggatgaagttctgtcccatggatccttctaaaatctacgtg
gcctctggtgagggcagactggacctgatgagcttcgagggttgcacacccacagtgctg
gcaacaaatgtagacagctaccacgataaccacgtttgcttttggttctgctgtgttgat
gtgtctgtgagcagacagatgttagtgactggagacaatgtgggacagctgctgctgctg
agtttggacggtcaaaagattttcaaggaaaagttgcacaaagccaaagtgacccacgcc
gagttcaattcccgctgtgactggttgttggccacagcttcagtcgaccacacggtcaaa
ctctgggatttgagaaacatgaaagacaagaaaagtttcctccatgaacttcctcacgag
aaagccgtcaactcggcctatttcaacccgctcgactgctccaagttactgaccacagat
cagtacgatcagatccgcgtctactcgtcctccgactggtccactcctcaacaaatcatc
cggcatcctcacaggcactttcagcatctcacacccatcaaggccacgtggcatccggtc
tacgacctgatcgtggcaggccgctaccctgacaaccgcatttgcctcagtgataagagg
accgtcgacttgtatgacgccaacacagcggaacttgtgtgtcagctgcaggatcccaca
gtagcagggatcaaatctattaataaattcaatcctctgggcgatgtgattggctctggg
atgggggtgacggtggtgctctggaacagaaacgagtccctgctcaatcagctggaagag
gaagagacgtccacgccgatgggcggacgcgggaaccactggagaggcgagcagccccct
cgccgaggcagagggggtccctctggggacgggaaaacgacgaagaggaagcttgcctct
ccggaaaaaacaggggccagaagcaaaaccacaacaagcaacacgcgagaaaaacaaccg
cagaggaggaagacatga
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