Tetraodon nigroviridis (spotted green pufferfish): GSTEN00016234G001
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Entry
GSTEN00016234G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
GSTEN00016234G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tng04040
]
GSTEN00016234G001
Ion channels [BR:
tng04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
GSTEN00016234G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ion_trans
Ank_5
Ank_3
DUF5348
YfmQ
Motif
Other DBs
NCBI-ProteinID:
CAF98502
UniProt:
Q4SLI0
LinkDB
All DBs
Position
7
AA seq
701 aa
AA seq
DB search
PKPDSNIYSITRLFEAVARRDTDSLANLHRYLHQNMKKLSDPLYQSHGKSALMKALLHLK
DGKNETVELLIRISEQMGDLDTFVNLAYTSAYYKGQTALHVAIERRSISYVKLLVSKGAD
VHARACGRFFQPHNGPNFYFGELPLSLAACTNQPLMVDFLLDQRADPKQRDSYGNTVLHA
LVVVADNSEENTKFITSMYDHILVTAARLYPKLKLEDIQNRNGLTPLTMATKTGKSGVSG
CWCETPAQKSPWNLDFVLRLQLFSHILKREFQDSDTKHLSRKFTEWVYGPVTCFLYDLAS
VDSYHSGSALEILVYGSDIPNRLEMLQEELLAQLLESKWKRFASKMFLSNFIFYLVYLFV
FTAVAYNKKDEQVSPWAPPTVENTPVLHSPGLLNLLPQLAYTIEHTFWGYLYVSGQLLTA
LANGYFFIVGILDMRKKRLKLQALLIDGYYEILFLLQAFLFLISAVLYLSGQDQYLGFLV
MSLALSWVNLLYFSRGNQHMGVYSIMIQKMILSDILRFLFVYGVFLLGFSAAVVTLLIEP
PVRNITSKGRLLFSSVGPEECVKPTYRNISYTMLELFKFTIGMGDMEFTEDYKYKEVFYV
LLIGYIILTYILLLNMLIALMNRTVETTAMESTSIWRLQRAITIMDMERRLPCCLRTWLR
CGAEKNLGSEQGDDRRWCFRVEEVNWNKWNIHLGKIDEDPG
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
ccgaagccagacagcaacatctacagcattacaaggttgtttgaggcggtggccagaaga
gacacggacagtctggccaacctgcaccggtacctgcaccagaacatgaagaaactctcc
gaccccctgtatcagtcccacggtaaatcggctctgatgaaggccctgctgcacctcaaa
gacggcaagaacgagacggtggagctgctcatccgcatctcggagcagatgggggacctg
gacacctttgtgaatctggcctacaccagcgcctactacaaagggcagaccgctctccac
gtggccatagagaggagaagcatctcctatgtgaagctgctggtcagcaaaggagccgac
gttcacgccagagcctgcgggaggttcttccagccgcacaacggccccaacttctacttt
ggtgagctgccgctgtcgctggcggcctgcaccaaccagcccctcatggtggacttcctc
ctggaccagcgagcggaccccaagcagagggactcctacggtaacactgtgctgcacgcc
ctggtggtggtggccgacaactcagaggagaacacaaagttcatcaccagcatgtacgac
cacatcctggtgacggcggcccggctctaccccaagctgaagctggaggacatccagaac
aggaacgggctgacgcctctaacaatggccaccaagaccggcaagagtggggtaagcggc
tgttggtgtgagacgccggcgcaaaaatccccttggaacctggattttgttctgcgtctg
cagctcttctcacacatcctgaaacgggagttccaggacagcgacaccaaacacctgtcc
cgtaaattcaccgagtgggtttacgggcccgtcacctgcttcctgtacgacctggcctcc
gtggactcctaccacagcgggtctgcgctggagatcctggtctacggcagcgacatcccg
aaccgcctggagatgctccaggaggagctgctggcccagctgctggagtcaaagtggaag
aggtttgcaagcaagatgttcctgtcgaacttcatcttctacctggtgtacctctttgtc
ttcacggctgtggcctacaacaagaaggatgaacaggtaagcccctgggctccgcctact
gttgaaaacacacctgtgcttcactcacctgggcttctgaacctcctcccccagttggcg
tatacgatcgaacacaccttttggggctacctgtatgtctccggccagctgctcacggct
ctggcaaacggctacttcttcatcgtagggattttggacatgaggaagaaacggctgaag
ctgcaggcgctgctgattgatggatattacgagatcctttttctcttgcaggccttcctc
ttcctgatctccgctgtcctgtacctgagcgggcaggaccagtatctgggcttcctggtg
atgtctctggctctcagctgggtcaacctgctctacttctccaggggtaaccaacacatg
ggcgtctacagcatcatgatacagaagatgattctcagcgacatcctgcgctttctcttt
gtgtacggggtctttctgttaggattttcagcagctgtggtcaccctgcttatcgagcct
cctgtgaggaatatcaccagtaaggggcgtttattatttagttccgtgggccccgaggag
tgtgtaaaacccacctacaggaacatctcctacaccatgctggagctcttcaagttcacc
atcggcatgggcgacatggagttcaccgaagactacaagtacaaggaggtcttctacgtg
ctcctcatcggctacatcatcctcacctacatcctgctgctcaacatgctcatcgccctc
atgaaccgcacggtggagaccaccgccatggagagcaccagcatctggcggctgcagagg
gccatcaccatcatggacatggagaggaggctcccctgctgtctgaggacctggcttcgc
tgcggcgcggagaagaacctgggctccgagcagggagacgaccgccgctggtgcttcaga
gtggaggaagtcaactggaacaaatggaacatccacctgggcaaaatcgatgaagatccc
ggc
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