KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00016317G001
Entry
GSTEN00016317G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tng00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    GSTEN00016317G001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tng03019]
    GSTEN00016317G001
   03009 Ribosome biogenesis [BR:tng03009]
    GSTEN00016317G001
Messenger RNA biogenesis [BR:tng03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     GSTEN00016317G001
Ribosome biogenesis [BR:tng03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    GSTEN00016317G001
SSDB
Motif
Pfam: RNase_T HTH_ABP1_N
Other DBs
NCBI-ProteinID: CAF98570
UniProt: Q4SLB2
LinkDB
Position
7
AA seq 248 aa
SMSQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIINQPDELLDGMSEWC
KEHHGKSGLTQAVRNSKITLEQAEYEFLSFVRQHTPPGQCPLAGGQLCACGQAVPGKIHA
AVHAPPPLQDHRCQHRQGALQARVQNLAIYLKGAVGAGILQLIKKKSFITAVVCCAEFTF
YILMVPFGNSNACRRWFPEEYKQVPPKKATHRALSDIYESIKELQFYRSSIFRVPAAAPL
SKIVENGG
NT seq 744 nt   +upstreamnt  +downstreamnt
tccatgtcccagaggatggtttgggtggacctggagatgacaggcctagacatcgagaaa
gaccaaatcatcgaaatggcctgtctgattacagactctgacctgaacattcttgctgag
gggcccaacctgatcatcaatcagccggacgagctgctggatggcatgtctgagtggtgt
aaagagcatcacggaaagtcaggactgacccaggctgtacgaaacagcaaaatcaccctg
gaacaagccgagtatgagttcctgtcgtttgtcagacagcacactccgcccggacagtgt
cccctcgctggtgggcaactctgtgcatgcggacaagcggttcctggaaaaatacatgcc
gcagttcatgcaccacctccactacaggatcatcgatgtcagcaccgtcaaggagctctg
caggcccgtgttcagaaccttgctatttacttaaaaggcgccgtgggcgctggaattctg
caattaattaaaaaaaaaagctttattacagctgtagtttgttgtgcagagtttaccttt
tatattctaatggttccttttggcaattccaatgcttgcaggcgctggtttccagaggaa
tacaagcaggtgcctcccaagaaagcaacccacagagccttgagtgacatctatgagagc
attaaagagctgcagttctacagatccagcatcttcagagtcccagcagcagcgccgctc
tccaagattgtggaaaacggaggc

DBGET integrated database retrieval system