Tetraodon nigroviridis (spotted green pufferfish): GSTEN00016317G001
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Entry
GSTEN00016317G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GSTEN00016317G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tng03019
]
GSTEN00016317G001
03009 Ribosome biogenesis [BR:
tng03009
]
GSTEN00016317G001
Messenger RNA biogenesis [BR:
tng03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GSTEN00016317G001
Ribosome biogenesis [BR:
tng03009
]
Eukaryotic type
Pre-60S particles
RNases
GSTEN00016317G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
HTH_ABP1_N
Motif
Other DBs
NCBI-ProteinID:
CAF98570
UniProt:
Q4SLB2
LinkDB
All DBs
Position
7
AA seq
248 aa
AA seq
DB search
SMSQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIINQPDELLDGMSEWC
KEHHGKSGLTQAVRNSKITLEQAEYEFLSFVRQHTPPGQCPLAGGQLCACGQAVPGKIHA
AVHAPPPLQDHRCQHRQGALQARVQNLAIYLKGAVGAGILQLIKKKSFITAVVCCAEFTF
YILMVPFGNSNACRRWFPEEYKQVPPKKATHRALSDIYESIKELQFYRSSIFRVPAAAPL
SKIVENGG
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
tccatgtcccagaggatggtttgggtggacctggagatgacaggcctagacatcgagaaa
gaccaaatcatcgaaatggcctgtctgattacagactctgacctgaacattcttgctgag
gggcccaacctgatcatcaatcagccggacgagctgctggatggcatgtctgagtggtgt
aaagagcatcacggaaagtcaggactgacccaggctgtacgaaacagcaaaatcaccctg
gaacaagccgagtatgagttcctgtcgtttgtcagacagcacactccgcccggacagtgt
cccctcgctggtgggcaactctgtgcatgcggacaagcggttcctggaaaaatacatgcc
gcagttcatgcaccacctccactacaggatcatcgatgtcagcaccgtcaaggagctctg
caggcccgtgttcagaaccttgctatttacttaaaaggcgccgtgggcgctggaattctg
caattaattaaaaaaaaaagctttattacagctgtagtttgttgtgcagagtttaccttt
tatattctaatggttccttttggcaattccaatgcttgcaggcgctggtttccagaggaa
tacaagcaggtgcctcccaagaaagcaacccacagagccttgagtgacatctatgagagc
attaaagagctgcagttctacagatccagcatcttcagagtcccagcagcagcgccgctc
tccaagattgtggaaaacggaggc
DBGET
integrated database retrieval system