Tetraodon nigroviridis (spotted green pufferfish): GSTEN00022212G001
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Entry
GSTEN00022212G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00022212G001
Ubiquitin system [BR:
tng04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
GSTEN00022212G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
WD40
NBCH_WD40
BBS2_Mid
Auxin_resp
Motif
Other DBs
NCBI-ProteinID:
CAG02962
UniProt:
Q4S8S0
LinkDB
All DBs
Position
7
AA seq
1416 aa
AA seq
DB search
SELYYLIARFLQSGPCKKAAQILIEELEEYELVPERWSWDGKKYKQTFQDWVIVNEHIPA
DYLLRVCQRIGPLIEKEVPPSVPGVQTLLGLGKQSLLRTSKSKYFLSHLHSLGFNINSIS
TYRLTCFCDLGCIHKVCSGSSIAALHRGRPPEPPVINGGPPNVVSTMAARQATGTARFSQ
VLPSSSYQHMKIHKRILGHLSSVYCVVFDRTGRRIFTGSDDCLVKIWATDDGRFLATLRG
HSAEICDMAVNYENTLIASASCDKTIRVWCCGPVHLSVCCRPTLPPSHPFSDQPVKFVER
SRPGVQVSTSSFSSGGMFMATGSTDHMIRVYYLGAETPMKVAEMDAHTDKVVVVQFSNSS
DSLRFVSGSRDGTAKIWRYQQQEWKAISLDMAAKLPGNTVANGDDKTKLVVTMVAWDRAD
TSVITAVSNYLLKVWSSTTGQLLHVLSGHDDEVFVMEAHPFDSRILLSAGHDGNIYMWDL
TKGAKIRNFFNMVTQHRGQIEGQGHGAIFDCKFSIDGQHFACTDSHGHLLIFGFGCSKPF
EKRMDAGIRGKCNWEILNPHLSFCLLGDGELVEQVLGQQTAENRESLLDNLIRQLQNEQD
ERHIAARQAEEAAAAAAEEGEAEVEVVVAPSAAPRRSGQVDGVWQMQHNTLRSQVATERD
LLAWSRRVMVYEVPHGVYRVSEECRRAKGDLECSFYNAERRKKPVPCTPKNEPLTTRLRS
LRPNKTKRQRHAYQTRSAQVRRRGTRSRNSRNRLNSGSRMDSDSDGEADEQVEQSEASSD
GEAQWQSESSSSDSSSDYSDWTADAGINLQPPKRSSRRPAQPQGYSSSEEEEGDNKTKEA
KKNEEKKKKSKETKQRPTSSLGELNPEEWLPPSWIMETVPRCSPFVPQMGDELIYFKQGH
QAYARAVRRAKAYSINPQKQPWNRLNLRDQESVKVVGIKYEVGPPTLCCLKLAFLDPVSG
KMTNESFSLKYHDMPDVIDFLVLQQFYNEAKEHNWQPGMRFRSIIDDAWWFGLVEDQEPL
QPEYPDSLFQCFAVKWDNGECEKMSPWDMEPIPEEAALPEQVGDGVEVAEEEMKALLYRP
QEGEWGAHTRDEECERVICGIEQLFTLEVAKAFASPVNLQDYPLYCAVVAYPTDLSTIRK
RLENRFYRRISALMWEVRYIEHNARTFNEPQSPIVATAKVVTDVLLRYIGDQSCTDILDL
YHKLKADISSGEEAKVSVSLLPPASAYLFSNVPKNTHLSNQNSNKRGAALEVKAWRGRCR
ELLRRMVASPDSQPFRQPVDLFEYPDYRDIIDTPMDLGTVSETLYEGNYENPMEFAKDIR
LIFSNSKAYTPNKKSQIYAMTLSLSAFFEKSIISIISDYKSAIQNERRTRQRLSYRDRLQ
NGGSSPPVSPSPSSEKQQRSRGRGCPTVLSKFRDEQ
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
tcagaactgtattacctcatcgccaggtttctgcagtcgggaccttgtaagaaagcagca
cagattctgattgaggaactggaggagtacgagttggtacctgaacgatggagttgggat
ggaaagaaatacaaacagacctttcaagattgggtgatcgtgaacgagcacattcctgca
gactacctgctccgtgtttgccagcgtatcggtccactcatagaaaaggaggtcccacct
agtgttcctggagtccaaacacttttaggacttgggaaacagtcactcctgcgcaccagc
aaaagcaagtattttttatcacatctacatagtttaggttttaacattaacagcatatca
acctatcggctaacatgtttctgcgacttaggctgtatacacaaagtgtgcagtggctca
tccatcgctgcactccatcgtgggcgtccacccgaacccccagtcattaatggaggcccc
cctaatgttgtgtccacaatggctgcccggcaggctacaggcacagctcgttttagccag
gtcctgccatcgtcttcctaccagcacatgaagatacataagcgcattcttggccacctc
tcttcagtgtactgtgtagtctttgaccgcaccggtcggcgaatatttacgggttctgat
gactgtctggtgaaaatctgggccacagatgacggtcgctttttggcaacactccgtggc
cattctgcagagatctgtgacatggctgtcaactacgagaacactctcattgcttcagcg
agctgtgacaagaccatccgagtgtggtgctgcggacctgtgcacctatcagtgtgctgc
aggcccacgctgcctccatcacatccattcagtgatcagccggtgaagtttgttgagagg
tcccggccaggagttcaggtgtccacgtcgtctttcagcagtggtggaatgttcatggct
actggcagcactgatcacatgatcagggtctattacctcggtgccgaaacaccgatgaag
gttgctgagatggacgctcatacggataaagttgtggttgttcagtttagcaatagtagt
gacagcctgcggtttgtgagtggcagtcgtgatggcacagcaaagatctggcgttaccag
cagcaggagtggaaggccatttcattagatatggctgccaaactccctgggaatactgtt
gccaacggtgatgataagaccaaactggtggtgactatggtagcttgggaccgtgctgat
acctctgtcattactgcggtgtcaaattacctgctcaaagtgtggagctcaaccactggg
cagctgctgcacgtgttatccggtcacgatgacgaggtgtttgtcatggaggctcaccca
ttcgactcccgcatcctgttgtctgctggccatgatgggaacatctacatgtgggacttg
accaaaggagcaaagattcgtaacttcttcaatatggtaacccagcaccgagggcagatt
gaagggcaaggccacggtgctatttttgactgcaagttctcaattgatgggcagcatttt
gcatgtaccgactcacacggacatctgctcatctttggctttggctgcagcaaaccattt
gaaaagagaatggatgcagggatcagaggtaaatgtaactgggagattttgaacccacat
ttgtctttttgcttgttaggtgatggggagttggttgagcaggtacttgggcagcaaaca
gctgaaaacagagagagtttgttggacaacctcatcagacagttgcagaacgagcaggat
gagcgtcacatcgcagcacggcaggcggaagaggcggcggcagcagcagcagaggagggg
gaggcagaggtggaggtggtcgtggctccgtccgctgctcctcgcaggagcgggcaggtg
gacggtgtgtggcagatgcagcataatactctgcgcagtcaagtagctacagagagagac
ctgctggcctggagccgcagagtcatggtctacgaggtgccgcacggcgtatacagagtt
tcagaggagtgcagacgagccaagggcgacctagagtgttctttttacaacgcagagagg
aggaagaagccagtcccctgcacacccaagaatgaaccacttaccacacgcctacgctcc
ctacgacccaacaagacaaaacgccagcgccatgcctatcagactcgctcagctcaagtc
cgccgccgtggaaccagaagtcggaattcaaggaatcgcctgaactcggggagccgcatg
gactccgacagtgacggagaggcagatgaacaggtggagcaaagtgaggcctcttctgat
ggagaagctcagtggcagagtgaaagtagctcaagtgactcatccagcgattattccgat
tggacagctgatgctgggatcaacctccaaccaccaaaaaggtcgagcaggaggcctgca
cagcctcaaggctacagcagctccgaggaggaagagggtgacaacaagacaaaggaggcc
aagaaaaatgaagagaagaagaaaaagtccaaagagaccaagcagagaccaacttcatct
ctgggtgagcttaatccagaggaatggcttcccccgtcctggataatggaaacggttccg
cgttgttccccgtttgtcccacaaatgggtgacgagctcatctacttcaaacaaggccat
caggcttacgcccgggctgtccgcagggccaaagcttacagtattaaccctcagaaacaa
ccctggaacagactcaacctcagggaccaggaatctgtaaaggtggttggaatcaaatat
gaggttggaccaccgacgctgtgctgccttaaactggctttcttggatccagtctcaggg
aagatgactaatgagtctttctcattaaagtatcatgacatgcccgatgtcattgatttt
ctggtgctgcagcagttctacaatgaagcgaaagagcacaactggcagccaggcatgcgc
ttccgcagcatcattgacgatgcctggtggttcgggctggtggaggaccaggagcctttg
cagccagagtatcctgacagcctgttccagtgttttgcagtgaagtgggataatggtgag
tgtgagaaaatgagtccctgggacatggagcctattcctgaagaagctgcattgccagaa
caggttggtgatggtgtggaggttgcggaggaagagatgaaggctcttctttacaggccc
caggagggagaatggggggcacacacacgagacgaagaatgtgagagagtcatctgtggc
atcgagcagctttttacactggaggtggccaaggcatttgcgtcaccagtaaacctgcag
gactacccgttgtactgcgctgtggtggcgtaccccactgacctcagcaccatccgcaag
cgactggagaaccgcttctacagacggatctcagcgttgatgtgggaggtgcgctacatc
gaacacaacgcacgcactttcaacgaacctcagagccccattgtagcaactgccaaagtg
gtgaccgacgttctcctgcgttatataggggaccagagctgcacagacatcttggatctg
taccacaaactgaaggctgatatcagcagcggagaagaagccaaggtgagtgtttcatta
ctcccccctgcctctgcttatcttttttcaaatgttccaaaaaatacccacttgtctaat
cagaattccaacaagcgcggtgcggctttggaagtgaaggcatggcgaggtcggtgccga
gagctgctgcgtcgaatggtggcctcaccagactcgcagccattcaggcagccagtggat
ctcttcgaatatccagattacagagacatcattgacacgcccatggatctgggcacggtg
tcggagaccttgtacgaaggcaattacgaaaacccaatggagtttgccaaagacattcgc
ctcattttcagcaactccaaggcgtacacaccgaacaagaagtcccagatctatgccatg
accctcagcttgtcggccttcttcgaaaaaagcatcatctccatcatctcggactacaag
tcggccattcagaacgagcggcgcacgcgtcagagactcagctacagggacagattacag
aatggaggcagctcaccgcctgttagtccctcccccagctcagaaaagcagcagcgcagc
agaggaagaggatgtccaaccgtcctctccaagttcagggacgagcagtga
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