Tetraodon nigroviridis (spotted green pufferfish): GSTEN00022976G001
Help
Entry
GSTEN00022976G001 CDS
T04346
Definition
(GenBank) unnamed protein product
KO
K16857
thrombospondin 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04115
p53 signaling pathway
tng04145
Phagosome
tng04350
TGF-beta signaling pathway
tng04510
Focal adhesion
tng04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
GSTEN00022976G001
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
GSTEN00022976G001
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
GSTEN00022976G001
09143 Cell growth and death
04115 p53 signaling pathway
GSTEN00022976G001
09144 Cellular community - eukaryotes
04510 Focal adhesion
GSTEN00022976G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tng04131
]
GSTEN00022976G001
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tng00536
]
GSTEN00022976G001
04990 Domain-containing proteins not elsewhere classified [BR:
tng04990
]
GSTEN00022976G001
Membrane trafficking [BR:
tng04131
]
Endocytosis
Phagocytosis
Opsonins
GSTEN00022976G001
Glycosaminoglycan binding proteins [BR:
tng00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
GSTEN00022976G001
Domain-containing proteins not elsewhere classified [BR:
tng04990
]
Thrombospondin domain-containing proteins
Thrombospondins
GSTEN00022976G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_CA
EGF_3
TSP1_ADAMTS
EGF
cEGF
TSP1_CCN
Motif
Other DBs
NCBI-ProteinID:
CAG03524
UniProt:
Q4S758
LinkDB
All DBs
Position
14
AA seq
1193 aa
AA seq
DB search
GIFLLLILWTCESTRVAESRDDNSVYDLFELVQVPRKNHGVTLVKGDDPYSPAYKILDPD
LIPAVPDQAFSDLIDSIRAERGFLLLLNFKQFKRTRGSLLTVEKKDGSGPVFEIISNGKA
NTLDIVFSTENKQQVVSIEEEDQAQLYVGCEDVNTAELDAPIQSILTQETPAGARLRIGK
GAVNDRFMGVLQNVRFVFGTTLDAILRNKGCQNSISSETMILENLNGSSAIRTEYTGHKT
KDLQMVCGFSCEDLFSMFKELKSLGVVVKELSNELRQLTDENKLIKNHIGIHNGVCIHNG
IMHKNKEEWKVDDCTECTCQNSATVCRKISCPVISCANATIPDRECCPHCGTPRDSAEDS
WSPWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSVQTRDCYIQECDKRFKQDGSWSHW
SPWSSCSVTCGAGVITRIRLCNSPTPQFGGKSCTGEGRQTEKCQKSSCPINGNWGPWSPW
DTCTLTCGGGVQIRKRLCNDPEPKYGGKDCVGDAKDIQICNNKSCPIDGCLSNPCFAGVK
CTSFPDGSWKCGKCPVGYSGNGIKCKDIDECKEVPDACFEFNGVHRCENTDPGYNCLPCP
PRYSGPQPYGKGVEQAVAKKQICTPRNPCLDGSHECNKNARCNYLGHFADPMYRCECKPG
YAGNGHICGEDTDLDGWPNLDLICVENATYHCKKDNCPNLPNSGQEDYDNDGIGDACDND
DDNDGIPDDRDNCPFVYNPRQYDYDRDDVGDRCDNCPYNSNPDQTDTDNNGEGDACAVDI
DGDGILNEKDNCPYVYNVDQRDTDLDGVGDMCDNCPLEHNPDQVDTDDDRVGDKCDSNQD
IDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDDDNDGIPDDKDNCRLAFNPDQLDS
DGDGRGDACKDDFDQDNVPDIYDVCPENFDISETDFRKFQMVPLDPKGTSQIDPNWVVRH
QGKELVQTVNCDPGIAVGYHEFNSVDFSGTFFINTERDDDYAGFVFGYQSSSRFYVVMWK
QITQTYWSNKPTKAQGYSGLSIKVVNSTTGPGEHLRNALWHTGNTAGQVRTLWHDPKNVG
WKDFTAYRWHLIHRPRTGLIRVVMYEGKKIMADSGSIYDKTYAGGRLGLFVFSQEMVYFS
DLKYECREKYLRHYVRRDTRMRPFSERPGRLYCTPLEKYSALREMGSLDNGPV
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
ggaatatttttgcttttgatactttggacctgtgagagtacgcgagtggcagagagccga
gacgacaacagcgtttatgacttgttcgagctcgtccaggtccccaggaagaaccacggg
gtcacgctggtcaagggcgatgatccctacagccctgcctacaagatcctcgacccggac
ctgatccccgccgtccccgaccaagccttcagtgacctgatcgactccatccgcgccgaa
agaggattcctcctgctgctcaacttcaagcagttcaaacgaaccaggggaagccttctc
accgtggagaagaaggacggctccggacccgtgtttgagatcatctccaacgggaaagcg
aacacgctggacatcgttttctccacggagaacaagcagcaggtggtttccatcgaagag
gaggaccaggcgcagctctacgtgggatgcgaggacgtgaacacagccgagctggacgcg
cccatccagagcatcctgacgcaggagaccccggccggtgcgcgcctccggatcggcaag
ggcgcagtgaacgaccggttcatgggcgttctacaaaacgtgcgctttgtgtttggaacc
acactagatgccatcctccggaacaaaggatgccaaaactctatttcaagtgaaactatg
atcctggagaacctgaatggctcctcagccatcagaacagagtacactggacacaagact
aaagacctgcagatggtctgcggcttttcctgcgaggacctgttcagcatgttcaaggaa
ctgaagagtctcggcgtggtcgtaaaagaactgtccaatgagctccgtcagctgacagat
gagaacaagctgataaagaaccacatcggcatccacaacggcgtctgcatccataatggc
atcatgcacaagaacaaagaagagtggaaggtagacgactgcactgagtgcacttgtcag
aactctgctactgtgtgtcgcaagatctcctgtcctgtgatctcctgcgctaatgctact
atacctgatcgggaatgctgccctcactgtggaacaccgagggactctgcagaggacagt
tggtcaccgtggtctgaatggacccattgttctgtatcatgtgggcggggcatccagcag
cgtggtcgctcttgcgatcgtatcaataacaactgtgagggcacctcagtgcagacccga
gactgctacatacaggagtgtgacaagcgattcaagcaagacggcagctggagtcactgg
tcgccttggtcatcttgctctgtcacctgtggcgctggtgtcattacccgtatccgtctg
tgtaactcccccaccccccagtttgggggcaaaagctgtacaggagagggtcgacaaact
gagaagtgtcaaaagtcttcgtgcccgatcaatggtaactgggggccttggtcaccgtgg
gacacatgcactctcacttgtggtggtggcgttcaaattcgtaagcgtctctgcaatgac
cccgaaccaaaatatggtggaaaagattgtgttggagatgccaaagacatccagatatgc
aacaacaaatcctgcccaattgatggatgcctgtctaacccctgctttgctggagtcaag
tgcaccagttttcctgatggttcctggaagtgtggaaagtgcccagttggctacagtggt
aatggaatcaagtgtaaagacattgatgagtgcaaggaggttcctgacgcgtgctttgag
tttaatggcgtgcaccgctgcgagaacacagatcctggctacaactgtctaccttgtcct
cctcgctactcaggaccccaaccgtatggtaaaggtgttgagcaggctgttgctaaaaaa
cagatctgcactcctcgtaatccctgccttgatggaagccatgagtgcaataaaaatgcc
cgctgtaactaccttggacactttgccgatcccatgtatcgctgtgagtgcaagcccggc
tatgctggcaatggccatatctgtggagaggacacggatctggatggttggcccaattta
gacctgatttgtgtggaaaacgccacctaccactgcaagaaggataactgtcccaacctt
cccaattcggggcaagaagattacgataacgatggtattggagatgcttgtgacaacgat
gatgacaatgatggcattcccgatgacagggacaactgtccatttgtgtacaaccccagg
cagtatgattatgaccgagacgatgtgggtgaccgctgtgacaactgcccgtacaatagt
aacccagaccagacagatacagacaataatggagagggagacgcttgtgctgtggacatt
gatggagatggcatactgaatgagaaggacaattgtccctatgtgtacaatgttgatcaa
agagacacagacctcgatggtgtgggagacatgtgtgacaactgtcccctggaacataat
cctgatcaggtggacacagatgacgatcgtgtaggagacaagtgtgacagcaaccaggac
atcgatgaagacggacaccagaacaatctggacaactgcccatacataccgaatgccaac
caggcagaccatgacaaggatggaaagggagacgcttgtgatcatgatgatgataatgat
ggcatccctgacgacaaggacaactgcaggcttgccttcaaccctgaccagctggactct
gatggcgatggtcgtggtgatgcgtgcaaggacgactttgaccaagacaatgtgcccgac
atctacgatgtgtgcccagagaactttgacattagtgagacggatttccgtaaattccag
atggttcctctggaccccaaaggcacatcgcagattgaccctaactgggttgtccgccat
caaggcaaagagctggtccagacagtcaactgtgatcctggtattgctgttggctaccat
gaattcaattcagtggacttcagcgggacgttcttcatcaacacagagagggatgatgac
tatgctggctttgtgtttggctaccagtccagctccaggttttacgttgtgatgtggaag
caaattacacagacttactggtcaaataaacccaccaaggcccagggttactctggccta
tccatcaaagtggtcaactcgaccaccggcccaggagagcacctccggaatgctctctgg
cacacaggaaacactgcgggacaagtccgtactctctggcacgaccctaagaatgttgga
tggaaggattttactgcctacaggtggcatctgatccatagaccaagaactggactcatc
agagttgtgatgtatgagggcaagaaaattatggctgattccggaagcatatatgacaag
acctatgcgggaggcagactaggtctttttgtcttctcacaagagatggtatacttctca
gacctcaagtatgaatgcagagagaaatatctgcgtcactatgtcaggagggacacaaga
atgaggcctttctccgagcggcccggccggctctactgtacacctttggagaagtactca
gcactgagggagatgggttcgcttgataatggacccgtctaa
Tetraodon nigroviridis (spotted green pufferfish): GSTEN00032374G001
Help
Entry
GSTEN00032374G001 CDS
T04346
Definition
(GenBank) unnamed protein product
KO
K16857
thrombospondin 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04115
p53 signaling pathway
tng04145
Phagosome
tng04350
TGF-beta signaling pathway
tng04510
Focal adhesion
tng04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
GSTEN00032374G001
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
GSTEN00032374G001
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
GSTEN00032374G001
09143 Cell growth and death
04115 p53 signaling pathway
GSTEN00032374G001
09144 Cellular community - eukaryotes
04510 Focal adhesion
GSTEN00032374G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tng04131
]
GSTEN00032374G001
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tng00536
]
GSTEN00032374G001
04990 Domain-containing proteins not elsewhere classified [BR:
tng04990
]
GSTEN00032374G001
Membrane trafficking [BR:
tng04131
]
Endocytosis
Phagocytosis
Opsonins
GSTEN00032374G001
Glycosaminoglycan binding proteins [BR:
tng00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
GSTEN00032374G001
Domain-containing proteins not elsewhere classified [BR:
tng04990
]
Thrombospondin domain-containing proteins
Thrombospondins
GSTEN00032374G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_3
TSP1_ADAMTS
Laminin_G_3
EGF_CA
cEGF
Laminin_G_2
Laminin_G_1
TSP1_CCN
EGF
zf-NADH-PPase
Motif
Other DBs
NCBI-ProteinID:
CAG10667
UniProt:
Q4RLR5
LinkDB
All DBs
Position
10
AA seq
1171 aa
AA seq
DB search
MMLCGIFLLLMLWGCEGARLAGSPDDNSVYDLFDLARVSKRQNGVTLVKGADPYSPAYKV
LNADLIPSVPDSSFRDILDSILAERGFLLIINLKQFRKSRGSILTIEKNDGSGSIFEIVS
NGRANTLEVLYSTANHQQVVTIEDTDLATGHWKNITLFVQDDRVKLYVGCEEVNEAEMDF
PIHKVLTQELADVATLRIAKGAVRDKFTGVLQNVRFVFGTSLDEILRNKGCQNGAVLTDV
MTLENPVNGSSPAVQTDHPGHKAKDVQPGQVCGLSCEDIAGIFKELRGLGVVVRKLSIDL
RKVSEESMLLKNETKQSGICIHNGIVYQDKNEWTVDSCTECTCQNSATVCRKISCPLVPC
ANATVPDGECCPRCGSSMVSAQGGWSPWSAWTQCSVTCGRGVQQRGRSCDRINSNCEGTS
VQTRDCYPQECDKRFKQDGAWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGMDCQGE
GRQTEICRKSPCPIDGGWGPWSPWDTCTLTCGKGIQTRKRLCSDPAPRFGGKDCVGEAKM
SQVCNKQDCPIDGCLSNPCFPGAMCTSFPDGSFRCGKCPLGYTGDGLTCKDIDECKEVPD
ACYVHNGVHLCENTEPGYNCLPCPARFSGPQPFGRGVEQATAKKQVCEPRNPCRDGSHDC
HKNANCIYLGVYSESMFRCECKPGYAGNGHICGEDSDLDGWPNHNLVCVENATYHCSKDN
CPSLPNSGQEDHDKDGLGDECDTDDDNDRIPDDRDNCPRLYNPAQYDADRDDVGDLCDNC
VFEANTDQTDTDSNGEGDACAVDIDGDGILNEDDNCPYVYNVDQRDTDRDGVGDHCDNCP
LEHNPDQIDSDSDRVGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHD
DDNDGIPDDKDNCRLAFNPDQTDSDGDGRGDICKDDFDQDSVLDIYDVCPENFAISETDF
RRFQMVPLDPTGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYDEFSAVDFSGTFFINTD
RDDDYAGFVFGYQSSSRFYTVMWKQITQTYWSTTPTRAQGYSGLSIKVVNSTTGPGEHLR
NALWHTGDTAGQVRTLWHDPKKIGWKDFTAYRWHLTHRPKTGLIRVVMYEGKRIMADSGN
IYDKTYAGGRLGLYVFSQEMVYFSDLKYECR
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtgtggcatctttttgctgctgatgctttggggctgcgaaggtgccaggctg
gctggcagcccagatgataacagtgtctatgacctttttgatctggcccgggtgagcaag
cgtcagaatggagtaactctggtcaaaggtgccgatccctacagccctgcctacaaggtt
ctgaatgcagacctgatcccctcagtccccgacagctccttcagggacatccttgactcc
atcctggctgagaggggcttcctgctcatcatcaacctgaagcagttcaggaaaagccga
ggcagcattttgaccattgagaagaatgacggctctggatccatttttgagattgtttcc
aacgggagggcaaacaccctggaagtgctctactccaccgccaaccaccagcaggtggtg
actatcgaggacacagatttggccacgggacactggaaaaacatcacgctgttcgttcaa
gacgatcgagtgaagctttacgtgggttgtgaggaagtcaacgaggcagagatggacttt
cccatccacaaagtgctcacccaggagctggcggacgtcgctaccctcaggatcgccaag
ggagcagtgagggacaaattcacgggagtgcttcagaacgtgcgctttgtttttgggacc
tcacttgatgagatattaagaaacaaaggatgccagaacggagctgtgttaaccgatgtc
atgaccctggagaaccccgtcaacggctccagccccgccgtccagaccgatcatcctggc
cacaaagccaaagatgtccagcctggacaggtctgtggtttgtcctgtgaagacatcgca
ggcatatttaaggagctcaggggacttggtgtggttgtgagaaaactgtccattgaccta
cgcaaagtgtctgaggaaagcatgctgctgaaaaatgagacgaaacaaagtggaatctgc
atccacaacggcattgtgtaccaggacaagaatgaatggacggtggacagctgcaccgag
tgcacctgccagaactctgctacggtgtgtcgcaaaatctcctgccccctggtcccatgc
gctaacgctaccgtgcctgatggagagtgctgcccacgctgcgggagttccatggtctca
gcacagggtggctggtccccctggtctgcgtggacccagtgttccgtgacctgtggtcgg
ggcgtccagcagcgtggacgctcctgcgaccgcatcaacagcaattgcgagggcacctcg
gtccagacccgtgactgctacccccaggaatgcgacaaacgattcaaacaggacggcgcc
tggagccactggtccccctggtcatcatgctctgtgacctgtggtgagggggttatcacc
cggatacgcctctgcaactcccccacaccccagatgggtggcatggactgccagggtgaa
ggacgtcaaactgaaatctgccgcaagtcaccttgtcccatcgatggagggtggggaccg
tggtcaccatgggacacctgcactctcacttgcggcaaaggaattcagacccgcaagcgt
ctgtgctcggaccctgcccccagatttggaggaaaggattgtgttggtgaggctaagatg
tctcaggtgtgcaacaaacaagactgtcctattgatggctgtctgtccaacccttgcttc
cctggtgcaatgtgcaccagtttcccagacggctccttccgttgtggcaagtgtccactt
ggctacaccggagacggcctcacttgcaaggacatcgatgagtgcaaagaggttcccgat
gcctgctacgttcataatggagtccatctgtgtgagaacacagaaccaggttacaactgt
ctgccctgccctgcacgcttctctggccctcagccctttgggaggggagtagagcaggca
actgccaaaaaacaggtttgtgagccccgcaatccctgtcgggatggcagccacgactgc
cacaaaaatgcaaactgcatttacctcggcgtctacagcgagtccatgttccgctgtgag
tgcaaacctgggtacgctggaaatggtcacatctgtggagaggacagcgacctggacgga
tggcccaaccacaacttggtgtgtgtggagaacgccacctaccactgcagcaaggacaac
tgccccagtcttcctaattccggccaggaggatcatgacaaagatggcctgggtgatgaa
tgcgacacggatgatgacaatgacaggattccagatgatagggacaactgtccaagactg
tacaaccctgcgcagtatgacgcagacagagatgatgttggtgatctctgtgacaactgt
gttttcgaggctaacactgaccaaactgacaccgacagtaatggagagggtgacgcctgt
gctgttgacattgacggtgatggtatcctgaacgaggacgacaactgcccgtatgtttat
aacgtggatcagagagacactgacagggacggcgtgggtgaccactgtgacaactgccct
ctggaacacaaccctgatcagattgattcagactcagatcgtgtgggagacaagtgtgac
aacaaccaagacattgatgaggacggtcaccagaacaacttggacaactgcccctatata
cccaacgccaaccaggctgaccatgacaaggatggaaagggtgatgcctgtgaccatgac
gacgacaacgatggcattcctgatgacaaagacaactgtcggctggcttttaaccctgat
cagacagattctgatggcgatggccgtggtgatatctgcaaagatgactttgatcaagac
agtgttttggacatttatgacgtgtgccctgagaattttgccatcagtgaaacagatttc
cgcagattccaaatggtgcctttagacccaacaggcacctcacagatcgaccccaactgg
gtggtgcgacatcagggcaaggagttggtccagactgtcaactgtgatcctggcatcgct
gttggttatgatgagttcagcgcagtggatttcagcgggaccttctttatcaacacggac
agagacgatgactacgctggctttgtgttcggttaccagtcaagctcacgcttctacacg
gtgatgtggaaacagatcacacagacgtactggtctaccacacccacgagagctcaaggt
tactctggcctgtcaatcaaagttgtcaattccaccactggtcccggtgagcacttgagg
aatgccctgtggcacacgggagacaccgcaggacaggtgcgtactctgtggcatgacccc
aagaaaattggctggaaggacttcacagcctacagatggcatctgacccacagacccaaa
actggacttattagagtggtcatgtacgaaggcaaaagaataatggctgattctggaaac
atctacgacaagacatacgctggtgggcgactaggcctgtacgtgttctctcaggagatg
gtttacttctctgatctgaagtatgaatgcaga
DBGET
integrated database retrieval system
