KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00024209G001
Entry
GSTEN00024209G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03420  Nucleotide excision repair
tng03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tng00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    GSTEN00024209G001
   03460 Fanconi anemia pathway
    GSTEN00024209G001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tng03032]
    GSTEN00024209G001
   03400 DNA repair and recombination proteins [BR:tng03400]
    GSTEN00024209G001
DNA replication proteins [BR:tng03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    GSTEN00024209G001
DNA repair and recombination proteins [BR:tng03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     GSTEN00024209G001
SSDB
Motif
Pfam: ERCC4 HHH_5
Other DBs
NCBI-ProteinID: CAG04487
UniProt: Q4S4E5
LinkDB
Position
2
AA seq 895 aa
MAGPLLEFETEMFLSLLGSDGLVVAAEGMGIDRVLLQFMRVYSEPGSLVLLLNTTTPEQE
YLTEQLRMEGVAHLPRTVTSDIQNTERYHVYTQGGVLFVTSRILVVDFLTDRIPAHLITG
ILVYRAHKIIESCQEAFILRLFRQKNKTGFIKAFTDKATALSSGFCQVERVMRNLFVKKL
LLWPRFQASVNAALDRHKPEVVELHVSLTPAMRAIQSAILELMSACLKELKRYNPTLEAE
DFSLENTIGNSFDKTIRHYLDPLWHQLGAKTKALVHDLKVLRVLSLYLTQYDCVTFLNLL
ESLRSSQKNFGSNSGWLFLDSSTSMFVNARARVYHIPDSKKKLKGGTDTEKPKSSVTEVQ
RKLVLEKSPKWEALTEVLQEIERENKSSQHGQGHVLICASDDRTCAQLQQYIRHGSDWLL
NRLYTRTIGKRDSAAAAAFELDLDRKDKERTAKGQKRKGTSQKKGTKSIKNKKRPSLTLT
QMMGKEAEEGMMGSSGDDEDESMEEAGKGEEEPKLDLSSDAYYGVLKEPLTVIHPLKGLT
DPHSLTRVLHEVEPSFVVLYDAELSFVRQLEIYKACRPGKPLRVYFLIYGGSTEEQKYLT
SLSKEKKAFEHLIREKATMVIPEEREGREDTNLDLARNMESANATTNSRKAGTLLLFQYD
CFRGQDQPREPSRVIVDMREFRSELPSLLHRRGLDIEPVTLEVGDYILSPDTCVERKSVS
DLIGSLQSGRLYTQCLSMTRYYRKPVLLIEFDPAKPFSLMARTDFRHEISSNDISSKLTL
LTLHFPRLRILWCPSPHATADLFLDLKQGRPEPDATAAQAVTAESDTVAESADLYNPGPY
DFLLKMPGVNTKNYRSLIKNADNLADLAKLSRDRLAEILGHVHNAKLLYEFLHNA
NT seq 2685 nt   +upstreamnt  +downstreamnt
atggcgggtccattgctggagttcgagaccgagatgtttctcagtctgctgggcagtgat
gggcttgtggtggcggcggaggggatgggcatcgaccgcgtccttctgcagttcatgcgg
gtttactcggagccgggaagcctggtgcttctgctcaacaccaccacacctgaacaggag
tatttgacggagcagctgcgtatggagggggtggcccacctgcccaggacagtcaccagc
gacatccagaacaccgagcgctatcatgtttacactcaaggaggagtgctttttgtcacc
agcagaattcttgttgtggactttctcactgaccgcatccctgctcatctcataacaggt
atcctggtgtatcgcgctcataaaatcattgagtcgtgtcaggaggccttcatccttcgt
ctgttcaggcagaagaacaagacgggcttcattaaagcgttcactgacaaagccacagct
ttgtcttctgggttctgccaggtggagcgtgtgatgaggaacctttttgtcaagaagctt
ttgttgtggcccaggtttcaagcttcggtgaacgcggctctggaccgccacaagccagag
gttgtggagctccatgtgtcgctgacaccagctatgagggccatccaaagtgccatcctg
gagctcatgagcgcctgtctgaaggaactcaagcgctacaaccctacgctggaagctgag
gacttctccttggagaacacaataggaaactccttcgacaagactattcgtcactatctg
gaccccttgtggcaccagctaggagccaaaacgaaggccctagtccacgatctgaaggtg
ttgagggtgctctcgctctacctaacccagtatgactgtgtaaccttcctcaatctgctg
gagtcgctacgctccagccaaaagaattttggatcgaattcaggttggttgttcctcgac
tccagcacctctatgtttgtaaatgccagagcaagagtgtatcacatccccgacagtaag
aaaaaactgaaaggaggaacagacacagagaaaccaaagtcttctgtcacagaggtgcag
cgaaaactggtgttggagaagagtccaaagtgggaggctctcactgaagtactgcaggag
attgagagagagaacaagagttcacagcatggacaaggtcatgtgctcatctgtgccagc
gatgacaggacctgcgcccagcttcagcagtacatcagacacggttctgactggctgctg
aaccgactctacacacgcaccatcggtaaaagagactccgccgcagctgccgcgtttgag
ctggatttggaccgaaaggacaaagaaaggactgccaaaggacagaagaggaagggaacc
tcacagaagaaaggcacaaaatcaataaagaacaagaaaaggccttcgctgaccctgacc
cagatgatggggaaagaggctgaagagggaatgatggggagcagtggggacgatgaggat
gaatccatggaggaggctggaaagggggaagaagagccgaagctagatttgtcttcagat
gcctattacggggtgttaaaggagccgctgactgtcatccacccgctgaagggcctcacg
gacccccacagcctgacgcgcgtgctgcacgaggtggagcccagcttcgtggtgctctac
gacgctgaactcagttttgttcgccagctggaaatctacaaagcgtgccggcctggaaaa
ccgctgcgggtttatttcctcatctacggaggctcgacggaagagcagaagtacctgacg
tctctttctaaggagaagaaagccttcgaacacctgatcagggaaaaggcgactatggtc
atcccagaggagagagaagggcgagaagataccaatttggacctagcaagaaacatggaa
tcagccaatgctactaccaactcacggaaagcaggcacgttgcttttattccagtatgac
tgtttccgaggtcaggatcagcccagagagccgtcgcgagtcatcgtggacatgcgagag
ttccgcagcgagctgccctcgctgctgcaccgccgcgggctggacattgagcccgtcacc
ctggaggtgggcgactacatcctcagcccagacacgtgtgtggagcgcaagagcgtcagc
gatctgattggctcgctgcagagcggccgcctctacactcagtgtctgtcaatgacccgc
tactacaggaaaccggtgctcctcattgagtttgacccagccaaacccttttctctgatg
gcccgaacagattttcgccacgaaatatcgtccaacgacatttcttccaagctgacttta
ctcaccttgcatttcccccggctccggatactctggtgtccctctccacacgccacagct
gacctgttcttggatcttaaacagggtcgtcctgaaccggacgccacggcggcgcaggca
gtcacagccgagtcggacacggtggcggaatctgcggacctctacaaccccgggccttat
gatttcttgttgaaaatgcccggcgtcaacacaaagaattacaggagtctgatcaagaat
gctgacaacctggcagatttagccaaactcagccgggaccggctggcagagatacttgga
catgtccacaacgctaaactgctctacgagttcctgcacaatgct

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