Tetraodon nigroviridis (spotted green pufferfish): GSTEN00028047G001
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Entry
GSTEN00028047G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K08529
retinoic acid receptor gamma
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tng03000
]
GSTEN00028047G001
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tng03310
]
GSTEN00028047G001
Transcription factors [BR:
tng03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
GSTEN00028047G001
Nuclear receptors [BR:
tng03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
GSTEN00028047G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-ProteinID:
CAG07392
UniProt:
Q4RW40
LinkDB
All DBs
Position
9
AA seq
456 aa
AA seq
DB search
AVETQSTSSEEMVPSSPSPPPPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKN
MVYTCHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEEVVLPESY
ELSGELEELVNKVSKAHQETFPSLGQLGKYTTNSSSDHRVQLDLGLWDKFSELSTKCIIK
IVEFAKRLPGFTSLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMH
NAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEA
LKIYARRRRPNKPHMFPRMLMKITDLRGISTKGQDEGRYRETKRGFGPLLEHHSVFCSRR
GKSHHPEDGDPGANASAHQGDAGEPRGLRRPNGEQRQPATAAAAPAAALNPGPEAGGRRR
GGQLGHGKRQRAVTGGRGRRRRRRRRRRRARQELGQ
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
gcggtggagacccagagcaccagctcagaggagatggtgcccagttccccgtctccacct
cccccgccccgtgtctacaagccctgcttcgtgtgccaggacaaatcctcggggtaccac
tatggagtcagctcctgcgagggctgcaagggcttcttccgccgcagtatccagaagaac
atggtgtacacctgccaccgagacaagaattgccagattaacaaggtcacgcgcaaccgc
tgccagtactgcaggctgcagaagtgctttgaggtcggcatgtccaaggaagcggtgcga
aatgacagaaacaaaaagaagaaagacgtgaaggaggaggtggtgctcccagagagctac
gagctgagtggagagctggaggagctggtcaataaagttagcaaagctcaccaagaaacc
ttcccatcgctcggccagctgggcaaatacacaactaactccagctcagaccaccgggtc
cagctggatctaggtttatgggacaagttcagcgagctctccacaaaatgcatcatcaag
attgtggaatttgcaaagcggctgccaggattcacctcactcaccatcgctgaccagatc
accctgctgaagtcagcttgcctggatatactgatgctgagaatctgcacacgttacact
ccagaacaagacactatgaccttctcagatggtctgactttgaaccggacgcagatgcac
aacgccggcttcgggccgctcacggacctggtgtttgcgtttgcgggtcagcttctgcct
ctggagatggacgacacagaaacgggcctcctcagcgccatctgcctcatctgcggagat
cgtatggatctagaggagcctgagaaagtggataagctgcaggagcctctgctggaggct
ctgaagatctacgctcgccgtcggcgccccaacaaacctcacatgtttccgcgtatgctg
atgaaaatcactgacctcaggggcatcagcaccaaaggtcaggatgaagggcgctatcgg
gagaccaagcgtggctttgggccgctgttagagcaccattctgttttctgctccaggcgc
ggaaagagccatcaccctgaagacggagatcccggggccaatgcctccgctcatcaggga
gatgctggagaacccagaggccttcgaagaccaaacggagagcaacgacagcccgccacc
gccgccgccgcccccgccgccgccctcaaccctggtcctgaagcaggaggccgaagacga
ggaggacagctgggccacggaaaacggcagcgagccgtcaccggaggaagaggacgaaga
cgacgacgacgacgtcggagacgaagagcgagacaggagctcggacagtga
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