Trichoplusia ni (cabbage looper): 113492530
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Entry
113492530 CDS
T05757
Name
(RefSeq) probable ATP-dependent RNA helicase CG8611
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
3.6.4.13
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tnl01009
]
113492530
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tnl03009
]
113492530
Protein phosphatases and associated proteins [BR:
tnl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113492530
Ribosome biogenesis [BR:
tnl03009
]
Eukaryotic type
Pre-60S particles
Helicases
113492530
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
ERCC3_RAD25_C
Harakiri
Motif
Other DBs
NCBI-GeneID:
113492530
NCBI-ProteinID:
XP_026725815
UniProt:
A0A7E5VC45
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Position
4:complement(2839930..2847998)
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AA seq
962 aa
AA seq
DB search
MDDLQLNISVPKKDKKKASAPQQNAGEYKFVSNAKFTGKTIARKRPQNLAQANREVIKNA
EGPPKKVAKFQPPTEEKSDDLGAKLRDLSENKGKYQGKNYQQLSDNIQLKQNKPRSGGWI
SSLFKNNPQVPRIGQRAVKPIVEKVFAGQTFSDLNIHPHTVANLQQNLGLKELMTVQQNA
VPVLLQGRDVLIRSQTGSGKTLAYALPIIEGLQAIRPKISRHDGIRVIVVIPTRELAVQT
YELFVKLVKPFHWIVPGLLSGGQKRKAEKARLRKGLSILVGTPGRINDHLRHTQSLNFAK
TGCLVLDEADRLLDMGYEKDVAAIVKAIEDHKKAATYDPMALVKQNIVKKIPDEEEAKQE
TNESENDEKSDVKHHLTEVFLSKEKQTILLSATLTKAVENLAGITLVDPVFVDTSEGKAI
IADSLKGKEDSENVISKPEVPVPVKVPEKPKAVKAEAKSSPEKKEIPVDAKRGLKAFTGF
NHQELFKAENSTDNNDAKIETATNNAADDDSDSDSDYEYFKAQKKYELTHPKVEKKADDD
DDDDDSDDDGDDDEQPSSSVNTFADALKSAIGEDELVLPATVNQSFIIVPMKLRLVTLCG
LIVEHCVNNKKGGKMIIFMATLEMVDYHSDLIETVLTGKEVKVKKKGQEKGKNSKSGKRK
GDDENDDDAQSSSSEDAEKFQVDYEEPSEGGLVPVDLEMFSLHGSMPHEQRMEVFKQFRA
ARCGVLICTDVAARGIDIPRVDLVLQYCAPASATDYVHRVGRTGRAAQVGAAVLFLLPSE
THFIRHLEQKRIRLRQTDESRALEALRTVVPAAATAQRAAVAVQARLERTAHTNTNWLLR
ASRAYTSWVRFYSGYPRDVKEYLDAKQLHLGHAAKAFALRDAPATLARRVKSNPSNKEKP
SNRLTIHKDEEKKRPGFEKAKFGSFGSRAAQRQSSMHTASEFDSGLSTLDQSQPKNKKKK
NK
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggatgatttacaattaaatatatcagtgcctaagaaggacaagaaaaaagcaagtgcg
ccacaacagaatgcgggtgaatataagtttgtttcgaacgctaagtttactggaaaaaca
atagcaagaaaaagaccgcaaaacttagcccaggctaaccgagaagtaataaaaaatgct
gaaggaccgccgaaaaaagtggccaaatttcaaccacccaccgaagaaaaatctgacgat
ttgggggcaaaactacgagatctcagtgaaaacaaaggcaaatatcaaggaaagaactat
cagcaactcagtgacaatatacagttaaaacagaataagccccggagtggtggttggata
tcttctctttttaagaacaatccgcaagtgccccgtattgggcaaagggctgtaaaaccc
attgttgaaaaagtgtttgctggacagaccttctcagatttgaatatacatccgcatact
gttgccaacttgcagcaaaatcttgggttgaaagaactaatgacagttcaacagaatgca
gtacctgtgttactgcaaggccgagatgttctaattaggtcccaaactggctcgggaaag
acactggcttatgcattgccaattatagaaggactacaggcaataagacctaaaataagt
agacatgatggcatcagggttattgtggtcatcccaaccagagagttggccgttcaaact
tatgaactttttgttaaactagtcaagcctttccattggatagttcctggtctattgagt
ggtggtcaaaaaaggaaggcagagaaggcccgacttagaaaaggtctcagtatcttagtt
ggtacaccaggtcggatcaatgatcacttgagacatacacaatccttaaactttgcaaaa
actggttgtctagttttggatgaggctgatcgtttactagacatgggttatgaaaaggat
gtagctgcaattgttaaagctatcgaagatcataagaaagccgccacatatgatcctatg
gctctagttaaacaaaatatagtaaagaaaattcctgacgaggaagaggcaaagcaggag
acaaatgaaagtgaaaatgatgagaaatcagatgtaaaacatcatttaacagaagtattt
ttgtctaaggaaaaacagactatattactatcagctacacttactaaggcagtagagaat
ttagctggaataacattggtggatcccgtatttgttgacacatcggagggcaaagctatt
attgcagattcactaaagggcaaagaagacagtgaaaacgttattagcaaaccagaagta
ccagtaccagttaaggtaccggaaaaacctaaagcagttaaagctgaagcaaaatcaagt
cctgaaaagaaagaaatacctgtagacgctaagagaggtctaaaggcattcactggtttt
aaccaccaagagctattcaaagctgaaaattctactgacaataatgacgcaaaaatagaa
acagctacaaacaacgccgcggatgacgacagtgacagtgactcagactacgaatacttt
aaagcacagaagaaatatgaacttacacatcctaaagtagaaaagaaagccgacgatgat
gacgatgatgatgatagtgatgatgatggcgatgatgatgaacaaccgtcttcatccgtc
aataccttcgctgatgctctgaaaagtgccataggtgaagatgagctagtactgcctgca
acagtaaaccaatcattcattatagttccaatgaaactaagattggtcacactttgcgga
ctgatcgtcgaacactgcgtcaataataaaaaaggtggtaaaatgataatatttatggca
acactagaaatggttgattatcattcagatctaatagagactgtgctaacgggaaaagaa
gttaaggttaaaaagaaaggtcaagagaaagggaagaactcaaaatctggaaaaagaaaa
ggcgatgatgaaaatgatgacgatgctcaatcatcatcatcggaagacgcggaaaaattc
caagtggactatgaagagccttcggaaggtggactagtgccagttgatctggagatgttc
agcttacacggctccatgcctcatgaacagagaatggaggttttcaaacagttccgcgcg
gctaggtgcggggtcctcatatgtactgatgttgcggccagaggtatagatatcccgcga
gtggacctcgtcctacagtactgcgcgccggcctctgccaccgactatgtgcacagggtg
ggtcgtacaggccgcgcggcgcaagtgggagccgctgtgctgttcttgctgcccagtgag
acgcatttcatcaggcatttagaacagaagagaatcagactgcgtcagacggacgagtcc
cgcgctctagaagcgttgcgcacggtggtcccggcggccgcgaccgcgcagcgcgccgcc
gtcgcggtgcaggcgcgcctcgagcgcaccgcacacaccaacaccaactggctgctcagg
gccagtcgtgcctacacatcctgggtacgtttctactcgggctaccctcgcgacgttaaa
gagtacttggacgcgaagcagctacatctcgggcacgcggccaaggcgttcgccctgagg
gacgcccccgcgacgcttgcgcgccgagtcaagtccaaccctagcaataaggagaaaccc
tccaacagacttaccatacataaggatgaagagaagaaacggccaggattcgaaaaagca
aagttcggttcatttggaagccgcgccgctcagagacagagctccatgcacacggccagc
gaattcgatagcggattgtccaccctcgaccaatcccagcccaagaacaagaaaaagaag
aacaaatga
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