Trichoplusia ni (cabbage looper): 113494699
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Entry
113494699 CDS
T05757
Name
(RefSeq) general transcription factor IIH subunit 3 isoform X1
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03022
Basal transcription factors
tnl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113494699
09124 Replication and repair
03420 Nucleotide excision repair
113494699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tnl03021
]
113494699
03400 DNA repair and recombination proteins [BR:
tnl03400
]
113494699
Transcription machinery [BR:
tnl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
113494699
DNA repair and recombination proteins [BR:
tnl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
113494699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
113494699
NCBI-ProteinID:
XP_026728923
UniProt:
A0A7E5VKS2
LinkDB
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Position
6:complement(856479..871164)
Genome browser
AA seq
291 aa
AA seq
DB search
MADDDTPSDSSLLVIIVDTNPNQRYITEDPKILTNCLDAVIGFANSHLMQKARNELAVIG
CHFHKSEYLYPSPGKPLDVRQIDGQYELFALVEKTIKMRLVNLVKSQPQEDKPGESLLAG
AVAMALCFIAKIRRECPPGLRMTSRILIVTGSSDTAAQYINYMNVFFTAQKQQVLIDVCS
LDKHLSLLQQGCDITGGLYLKVPTLDGLLQYLLWVFLPESSERGKLVLPGRGRVDYRAAC
FCHRELLTIGYVCSVCLSVFCKFSPICTTCHTVFKIGGPLPIKPKKKKMKI
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgacgatactccatcagatagcagcctccttgttataatagtagacaccaat
cccaaccagcgctacataaccgaggatcctaagatattaacaaattgcctggatgccgtc
atcgggtttgctaactcacacctcatgcagaaggctaggaatgaactggctgttataggc
tgccattttcataagagtgaatacttatacccgtcacctggtaaaccattggatgtaaga
caaattgatggccagtatgaattgttcgcattagtagagaaaacaattaaaatgaggtta
gtaaacttagtgaagagccagccacaagaagataaaccaggagagtcattgctggctggt
gctgttgctatggctctctgttttattgccaaaatccgccgggaatgtcctccaggtctc
cgtatgacgagccgcattctgatagttactggcagcagtgacaccgcagcacaatacata
aactatatgaatgttttctttactgcacagaaacagcaagtgttgatcgacgtgtgttcc
ctggacaagcacctgagcctgctgcagcaaggctgtgacatcacaggtggcctgtacctc
aaggtgcccacactggatgggctgctgcagtacttactgtgggtgttcctgccggagagc
agcgagcgcggcaagctggtcctgccgggccgcggccgcgtggactaccgcgccgcctgc
ttctgccacagggagctgctcactatcggatatgtgtgctcagtgtgtcttagcgtgttc
tgtaaattcagcccaatatgcacgacatgccatacggtgttcaagatcggcggtcctctg
ccaattaagcccaaaaagaagaagatgaagatataa
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