Trichoplusia ni (cabbage looper): 113504594
Help
Entry
113504594 CDS
T05757
Name
(RefSeq) chromodomain-helicase-DNA-binding protein Mi-2 homolog isoform X1
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113504594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tnl03036
]
113504594
Chromosome and associated proteins [BR:
tnl03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
113504594
Chromatin remodeling factors
NuRD complex
113504594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHDCT2
SNF2-rel_dom
CHDII_SANT-like
CHDNT
Helicase_C
DUF1087
PHD
Chromo
HDA2-3
ResIII
PHD_2
HMG_box
AAA_22
DEAD
Motif
Other DBs
NCBI-GeneID:
113504594
NCBI-ProteinID:
XP_026742775
UniProt:
A0A7E5WPT3
LinkDB
All DBs
Position
22:complement(3701239..3717763)
Genome browser
AA seq
1976 aa
AA seq
DB search
MASDDEVDGSFAGDEDVEEGEGQNENSGESDEAPPKEDEDYSPEDGRKKKKGKKRKARGE
EKKGRKKKKKRKNESEEDVTNKDEEFGLEIEAEGDSDYALSAMSSTKKSRKGRGSKHNTS
VTPAASDSGSAGMPTVEEVCSSFGLTDVDIQYSDADLENLTSYKLFQQHVRPLLVKENPK
VPVSKLMMLVAAKWRLFCETNPHLGSGTPAMSEDNTNTSTTSDYVPKTGRPGRTPKEVKN
EEVVEEPEEEEEEEQSDEGATAPRKRGRKPKHSTTPATPRGKPGRKPKVPTLKIKFSKRK
RTSSEEDQEGSAVNSDSDAEFEQMLAEAEEPKPATAAASDESVPVKEDDPAVPQPKKKAK
TKIGNKSKKKKKLKTTSKFPDGTEGEQEHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPE
LEETPEGRWSCPHCEAEGNQDQDDDDEHQEFCRICKDGGELLCCDSCPSAYHRFCLNPPL
EEVPDGEWKCPRCSCPPLEGKVAKILTWRWKEQSAKSKAPRSREFFVKWHERSYWHCSWI
SELQLDVFHPLMYRYYMRKSDPEEPPKLEEPLDERDGRVKRLKDKQDHDTDEKILEEKYY
RYGVKPEWLVVHRVINHRTSRDGTTYYLVKWRDLSYDQATWESENADIAGLKNAMEYYQD
MRAFITSEGKTKGTKGKKAGRKSKNKDIIDEDDSSAGLQMKPKKYNPPPDRPTTNLNKKY
EDQPPFVYETGMQLHPYQLEGLNWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLFKEG
HCKGPFLVSVPLSTIINWEREFELWAPDLYCITYVGDKDSRAVIRENELTFDDGANRGGR
PSKIKSQVKFNVLLTSYELVSIDATCLGSIDWAVLVVDEAHRLKSNQSKFFRLLAGYHIN
YKLLLTGTPLQNNLEELFHLLNFLNKDKFNDLAAFQNEFADVSKEEQVKRLHEMLGPHML
RRLKADVLKNMPAKSEFIVRVELSPMQKKYYKYILTRNYEALNPKSGGQTVSLLNVMMDL
KKCCNHPYLFPVAAEEAPLNPHGNYDTQALIKASGKLVLMSKMLRQLKEQGHRVLIFSQM
TKMLDILEDFLEGEGYKYERIDGGITGTIRQEAIDRFNAPGAQQFVFLLSTRAGGLGINL
ATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLT
HLVVRPGMGGKGANFTKQELDDILRFGTEELFKEDEGKEEAIHYDDRAVGELLDRSKEGI
EQKESWANEYLSSFKVASYSTKEGDGDEEVDTEIIKQEAENTDPAYWIKLLRHHYEQHQE
DQARTLGKGKRVRKQVNYNDGIVTQTENREDTTWQENGSDYNSDFSQGSEDDKEDDDFDE
KNDNGDLLSRRSKRRLERREERDRPLPPLLARVGGNMEVLGFNARQRKSFLNAIMRYGMP
PQDAFNSQWLVRDLRGKSERNFKAYVSLFMRHLCEPGADNAETFADGVPREGLSRQHVLT
RIGVMSLIRKKVQEFEHINGYYSMPEMIRKPVEPVKSAAGESAAPSPAPSTATPITSAAP
SPAPAAAAPAAAAAPATPATPAGSDKDDKDDIKEEKPDKDLKEKDEPMDTSDIKEENADE
KDSNKDKSEDSKDGERRMSVDEDPKDDEKSNEKKDDKDAVKVKDEKEDIDKKDDVKSEKA
ESEASEKPKDEKKDEDDDDVVLVKEEEDLKVERRKFMFNIADGGFTELHTLWLNEERAAA
PGREYEIWHRRHDYWLLAGIVTHGYGRWQDIQNDLRFAIINEPFKMDVGKGNFLEIKNKF
LARRFKLLEQALVIEEQLRRAAYLNLTQDPNHPAMSLNARFAEVECLAESHQHLSKESLA
GNKPANAVLHKVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLQMSERSILSRLAATAG
NPVPAAQMPQFPAGFQSGGSLPGFSPAAAAAANFSNFRPQYSVPGQPASSGSSNKS
NT seq
5931 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgatgatgaagtagacggttcgttcgcaggcgacgaggacgtggaggaaggt
gagggtcaaaatgagaattctggagagagtgatgaagcaccaccaaaggaggatgaggac
tactcacctgaagatggcagaaagaagaaaaagggtaagaaaaggaaagcccgaggagaa
gagaagaaaggtagaaagaaaaagaagaagcgcaagaatgagagtgaagaggatgtcacc
aataaggatgaagagtttggccttgagatcgaggcagaaggagacagtgactatgctctc
agtgccatgtcatcgacaaagaagtcccgtaaaggcaggggcagtaaacacaacacgtct
gtcacaccagctgcttcagattccggatcggcaggtatgccgacagttgaagaggtgtgc
tcatcatttggactcactgacgtcgatatccagtattcagacgccgacttagaaaacttg
acttcgtacaaactgttccagcagcatgtgcgaccattgctcgtcaaagagaaccctaag
gttccagtatcaaagttgatgatgttagtggcagcaaaatggcgtctgttctgtgagaca
aacccacatctcggcagcggaactccggcgatgtctgaggacaacaccaacacatccaca
acatcagattatgtgcctaaaacaggcagaccaggacgcactcctaaagaggttaagaat
gaagaagtagtggaagaacccgaagaggaggaagaagaggaacagagcgacgaaggtgca
acggcgccgcgcaagcgaggccgcaagcccaagcactcgaccacgcccgccacgccgcgc
ggcaagcccggccgcaagcccaaggtgcccacgctcaagatcaagttcagcaagcgcaag
cggaccagcagcgaggaagaccaggagggcagcgcagtgaactctgattcggacgctgaa
ttcgaacagatgttggctgaggcggaggaacccaagccggccaccgccgcggcctcggac
gagagtgttcccgtcaaggaagatgacccagctgtgccgcaaccgaaaaagaaggcaaag
actaagataggtaataagagcaaaaagaagaagaaattgaaaactacaagcaagttccct
gatggcactgaaggagaacaggaacaccaggattactgcgaggtgtgccagcaaggcggc
gagatcatcctgtgcgacacgtgtccgcgcgcgtaccacctcgtgtgtctggagcccgag
ctggaggagacgcccgagggccgctggtcgtgtccgcactgcgaggccgagggcaaccag
gaccaggacgacgacgacgagcatcaggagttctgccgaatatgtaaggacggcggcgag
ctactgtgctgcgactcgtgtccgtcggcgtaccatcgcttctgtctgaatccaccgctc
gaggaggtgccggacggggagtggaagtgtcctcgatgtagttgtccaccgctagagggc
aaagtggcgaagatattaacatggcggtggaaagaacagtcggccaagtcgaaggcgcca
cggtccagagagttcttcgtgaagtggcatgagcgctcctactggcattgtagctggata
tctgagttacagctggacgtgttccaccctctgatgtaccgctactatatgcgtaagtca
gaccctgaggagccgccgaaactagaagagccgttggatgagcgcgacggacgcgtcaag
cggctcaaggacaagcaggaccatgacaccgatgagaagatactcgaggagaaatattac
agatatggtgtgaaaccagaatggctggtcgtgcatcgagtgataaatcaccgcacttcc
cgcgacggtactacttactaccttgtgaagtggcgcgatctctcttacgatcaagccact
tgggagtcagagaatgcagatatcgccggattgaagaatgctatggaatactatcaggac
atgcgcgctttcatcacatccgaaggaaaaacaaaaggcaccaaaggcaagaaggccggt
cgtaagagcaagaataaggacattattgacgaagacgacagcagtgccggcttgcagatg
aagccaaagaaatacaacccaccgcccgaccgccccaccaccaacctcaacaagaagtac
gaggaccagccgcccttcgtgtacgaaaccggtatgcagctgcatccttaccagctggag
gggctcaactggctgcggtactcctggggacaggggatcgatacaattctcgctgacgag
atgggtctcggcaagactattcagactgtcacattcctttactcgctgttcaaggaggga
cactgcaagggaccgttccttgtgtcagtaccattgtccactatcattaattgggaacgt
gagttcgaactgtgggctccagacctatattgcatcacttatgtaggtgacaaagattca
agagctgttatcagagaaaacgaactgactttcgatgacggcgccaacagaggaggaagg
ccgtcgaagattaaatcacaagtgaaattcaatgtactcctcacgtcatacgagttggta
tctatcgatgccacctgtctcgggtctatcgactgggcagtccttgtggttgacgaggcc
cacaggctgaagagcaaccagtcaaagttcttcaggcttttagctggttatcacattaat
tacaagctgcttctaactggaactcctctacaaaacaacctagaagagttgttccatctt
ttgaacttcttaaataaagataagttcaacgatcttgccgcattccaaaacgaatttgcc
gatgtgtcgaaggaagaacaagttaaaaggcttcacgagatgttgggtccgcatatgctg
cggcgtctcaaggccgacgtgcttaagaacatgccggctaaatcagagttcatcgtgcgt
gtagagttatctcccatgcagaagaaatactacaagtatattttgacgaggaactacgaa
gctttgaaccctaagagtggcggtcagactgtctcattgctcaacgtcatgatggacctg
aagaagtgttgtaaccatccttacttgttccctgtggctgccgaggaagctccgctcaat
cctcacggtaactacgatacacaagcattgatcaaggcttccggaaaactggttctcatg
tcgaaaatgttaaggcagcttaaagagcaaggtcacagagtccttattttctctcagatg
acaaagatgttggatatcctcgaagatttcttggagggagaaggctacaaatatgagaga
attgacggtggtatcaccggaacaattcgtcaggaagctatcgacaggtttaatgccccg
ggcgctcaacaatttgtgttcttgctttcgactagggctggtggtttaggtatcaactta
gccacagccgacactgtaatcatctacgattctgactggaatcctcacaacgacattcag
gccttttcacgtgcccatcgtatcggtcaagcaaacaaagtgatgatctaccgtttcgtc
acgcgcaacagtgtggaagagagggttacacaagtagcaaagaggaaaatgatgttgact
cacttggttgtacgtcctggcatgggtggaaagggcgctaactttactaagcaagagttg
gacgacatcctcaggtttggtacagaggaattgttcaaagaagatgaaggaaaagaagaa
gctattcattatgacgacagggctgttggagaattgctcgatcgttctaaggaaggtatt
gaacagaaagagtcctgggccaatgaatatcttagttcctttaaggtcgccagttattcc
acaaaagaaggcgacggcgatgaagaagttgacactgaaatcatcaaacaggaggctgaa
aacactgacccagcttactggattaaactgctcaggcatcattatgagcaacaccaagag
gaccaggccagaacactgggcaagggtaaacgtgttcgtaaacaagtcaactacaatgac
ggtatcgttacacagactgagaatagagaggatacgacgtggcaggagaacggctcggac
tataactccgacttctctcaaggcagtgaagatgacaaggaggacgatgactttgatgag
aagaatgacaacggtgacctgctgagcaggcgcagcaagaggaggctggagcggcgcgag
gagagagaccggccgctgccgccgctactggcgagggtcggagggaacatggaggtgctc
gggttcaatgcccgacagcgcaagtccttcctcaacgccatcatgcgctacggcatgccg
ccgcaggacgccttcaactcgcagtggctcgtcagggatctcaggggcaagtccgaacgc
aacttcaaggcgtacgtgtcgctgttcatgcggcatctgtgcgagcccggcgcggataac
gctgaaacttttgcagacggcgtgccacgagagggtctgtctaggcagcacgtgttaaca
cgaattggagtgatgagtctgattagaaagaaggttcaggagttcgagcatattaacggc
tactacagcatgccggagatgatccgcaagcccgtggagccggtgaagtcagcagcgggc
gagagtgcggcgcccagccccgcgccctccacggccacgcccatcacatccgccgcgccc
tcccccgcgcccgccgccgccgcgcccgccgccgccgccgcgcccgccacgcccgccaca
cccgccggctccgacaaggacgacaaggatgacatcaaggaagagaagcccgataaggac
ctcaaggagaaggacgagcccatggacactagcgacatcaaggaggagaacgccgacgag
aaagactcgaacaaggataaatccgaggacagcaaggatggcgaacgacgcatgtccgtg
gacgaagatcctaaagacgatgagaaatctaatgagaagaaggacgataaagatgccgtc
aaggtcaaggacgagaaggaagacatcgacaagaaagatgatgtcaagagcgagaaagca
gagtccgaagcttccgagaaacctaaagatgagaagaaggacgaggacgacgacgatgtg
gtgctagtgaaagaggaagaggatctcaaggtggaacggcgcaagttcatgttcaacatt
gcggacggcggcttcaccgagctgcacacgctgtggctcaacgaggagcgcgccgccgcg
cccggccgcgagtacgagatctggcatcgcaggcacgactactggctgctggccggcatc
gtcacgcatggctacggccgctggcaggacatacagaacgacctgcgcttcgccatcatc
aacgaacccttcaagatggacgtcggcaagggcaacttcctggaaatcaaaaacaagttc
ctcgccaggcgttttaagctcctagagcaagcactggtgatcgaggagcaacttcgtcgc
gcggcgtacctgaacctgacgcaggaccccaaccacccggccatgtcactcaacgcgcgc
ttcgcagaggtcgagtgtctggccgagtcgcaccagcacctcagcaaggagtcgctggcc
ggcaacaagcccgccaacgctgtgctgcataaggtgctgaaccagctggaggagctgctg
tcggacatgaagtcggacgtgtcccgcctgccggccacgctggcgcgcatcccgcccgtg
gcgcagcgcctgcagatgtcggagcgcagcatcctgtcgcgcctcgccgccaccgccggc
aaccccgtgcccgcagcacaaatgccgcagttccccgcgggcttccagtcgggcggctcg
ctgccgggcttctccccggcggcggcggctgcggccaacttctccaacttccgcccgcag
tactccgtgcccggacagcccgcctccagtggatcctctaataaatcataa
DBGET
integrated database retrieval system
