Thermotoga petrophila RKU-10: Tnap_0291
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Entry
Tnap_0291 CDS
T01139
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tnp
Thermotoga petrophila RKU-10
Pathway
tnp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tnp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Tnap_0291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tnp03400
]
Tnap_0291
Enzymes [BR:
tnp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Tnap_0291
DNA repair and recombination proteins [BR:
tnp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Tnap_0291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADA66395
UniProt:
D2C609
LinkDB
All DBs
Position
complement(291772..292353)
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AA seq
193 aa
AA seq
DB search
MYTREELMEIVSERVKKCTACPLHLNRTNVVVGEGNLDTRIVFVGEGPGEEEDKTGRPFV
GRAGMLLTELLRESGIRREDVYICNVVKCRPPNNRTPTPEEQAACGHFLLAQIEIINPDV
IVALGATALSFLMDGKKVSITKIRGNPIDWLAGKKVIPTFHPSYLLRNRSNELRKIVLED
IEKAKSFIKKEGR
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
ttgtatacaagggaagaactcatggagatagtgtcagagagagtgaaaaagtgtacggct
tgcccacttcatctgaataggacaaacgttgtcgtaggagaaggaaatctggatacgagg
atcgtttttgtgggagaaggaccgggagaggaagaagacaagacgggaagacctttcgtc
ggaagagcgggaatgcttctgacggagctactcagagaatcaggtatcagaagagaagat
gtttacatatgcaacgttgtgaaatgcaggcctcccaacaacagaacacccactcctgaa
gaacaggcggcatgtggacattttttactcgctcagatcgaaatcatcaacccagatgtg
atagttgctctcggagccacggcattgtctttcctcatggatgggaaaaaggtatccata
accaaaatcagaggaaatcccatcgactggctcgcaggaaaaaaggtcattccaacattc
catccgagttatcttctgagaaatagaagtaatgaactcagaaagatcgttcttgaggat
attgagaaagcaaaaagtttcataaagaaggagggtcgatag
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