Tateyamaria omphalii: BWR18_06580
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Entry
BWR18_06580 CDS
T04652
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
tom
Tateyamaria omphalii
Brite
KEGG Orthology (KO) [BR:
tom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tom03016
]
BWR18_06580
Enzymes [BR:
tom01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BWR18_06580
Transfer RNA biogenesis [BR:
tom03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BWR18_06580
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
APX11383
UniProt:
A0A1P8MTS0
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All DBs
Position
1327555..1328715
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AA seq
386 aa
AA seq
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MRTITTTDALAEFCTRARAHPYVTVDTEFLRERTYYSKLCLVQLAMPGTEDDTAVLVDPL
AKGLSLEPLYALFRDTSVVKVFHAARQDLEIFYVDAQVFPEPLFDTQVAAMVCGFGEQVG
YETLVRKIAKQPLDKTSRFTDWSRRPLTDAQKTYAIADVTHLRQIYEFLAAKLADSGRAR
WVSEELQILLSPDTYIIDPEHAWKRVKTRTNSARFLAVVKELAAFREAHAQSRNVPRNRV
FKDDALVELASNKPKSYEDLGRSRLLLREARKGDIADGILAAVKRGVEMDPDTMPRPDRS
REKLQVNPALADLLRVLLKAKTESAGVAAKLIASAADLDALAAGVRDVPALKGWRSEVFG
TDALRLCDGQVALTAKGADVQIIPLD
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccatcacgacaacggacgcgctggccgaattctgtacccgggcccgcgcccac
ccgtatgtgactgtcgacactgaattcctgcgcgaacgcacctattactccaaactctgc
cttgtgcagcttgcgatgcccggcacggaggacgacaccgccgtgttggtcgacccgctg
gccaagggcctgtcgcttgagccgctctacgcgcttttccgcgacacatcggtggtcaag
gtgttccacgccgcgcgccaggacctcgagatcttctatgtcgatgcccaggtctttccc
gagccgctttttgacacccaggtcgccgccatggtctgcggatttggcgagcaggtgggc
tatgagaccctcgtgcgcaagattgccaagcagccgctggacaagacatcgcgctttacc
gactggtcacgcaggccgttgacggacgcgcagaaaacctatgccatcgcggacgtgacc
catttgcgccagatctatgaattcctggccgccaagctggccgacagcgggcgcgcgcgc
tgggtgtccgaagagttgcagatcctgctcagccccgacacctacatcatcgaccccgaa
cacgcctggaaacgggtcaagacgcgcaccaattccgcccgctttctggccgtggtcaag
gaactggccgcgttccgcgaggcacatgcgcagtcccggaacgtgccgcgcaaccgggtg
ttcaaggacgacgcgctggtggaactggccagcaacaaacccaaaagctacgaagacctg
ggccgctcacgcctgctgttgcgcgaagcgcgcaagggcgacattgccgatgggatcctc
gctgccgtcaaacgcggggtcgagatggaccccgacaccatgccgcgccccgaccgatcg
cgtgaaaagctgcaggtgaaccccgcgcttgccgatctgctgcgggtcctgctcaaggcc
aagacggaaagcgccggtgtcgcggcgaagctgatcgcctcagccgccgacctcgacgcg
ctggcggcaggggtgcgggacgtgcccgcgctcaaggggtggcggtcggaagtgttcggc
acggatgcgctgcggctctgcgacgggcaggtggctctgacagccaagggcgccgacgtt
cagatcatcccgctggactga
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